Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08]
37,377 sequences; 493,775,940 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq1148 203 4e-47
seq10769 87.8 2e-12
>seq1148
Length=2189075
Score = 203 bits (224), Expect = 4e-47
Identities = 838/1303 (64%), Gaps = 38/1303 (3%)
Strand=Plus/Plus
Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001
|| || ||| | ||||| | ||||| | |||| ||||| || | ||| || || ||||||
Sbjct 533127 TATATGTTGCTGGTGTACGCCTCAATGGACTCGTTGTTGCCAAGGATCTGCGCAGTGGAG 533186
Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 114061
|| ||||||||||| |||| || |||||||| | | ||| | | || |||
Sbjct 533187 GCGGTGGGCATGGGCGCCAGCAGCAGGCTGTTTCTCACACCGTGCTTGGCGATCTTCTCC 533246
Query 114062 TTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGG 114121
||||| |||||| | || | | || ||||||||| ||| ||||||||
Sbjct 533247 TTGAGTAATGTCCAGTCCCACAGCGGCGTGGGAATCCGCTGCCACATGTCATACTGGAGG 533306
Query 114122 ATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAAT 114181
|| || | | | | || || ||| | |||||||| ||||| | | | ||||
Sbjct 533307 ATCCCCTTGCTGACAGGAGAGCCCGGGTACGTCTCGTAGGGGCCGTGCTCAGCGGCCAGC 533366
Query 114182 TCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCC 114241
||| |||| ||||| || || |||| || | ||||| || || || ||| | |
Sbjct 533367 TCGCAGCTGGCCTCCAGCGCGGCGTAGTAGAGAGTCTCGAAGATCTGAATATTGAGTAGT 533426
Query 114242 TTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGG 114301
| |||||| | ||||| | | || | ||| || | || || || || |||
Sbjct 533427 TGCGCCTCGGGGCTCTCAAAGGGCTGCCGCATGAGAATGAAGGCGTCGGCCAGCCCCTGG 533486
Query 114302 ACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC---CACGGGA 114358
|| |||| |||||| || || || | ||| || || | || ||| ||| ||
Sbjct 533487 ACGCCGATGCCAATGGGCCGGTGGCGCATGTTGGAGCGCTGCGC---CTCAGGCACCGGG 533543
Query 114359 TAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGA 114418
|| | || | ||||| | ||| || || || ||| || || || |||| |
Sbjct 533544 TAGTAGTTGATGTCGATGATCCTGTTGAGGTTCTTGACGATGACTTTGGTGACGGCCGCC 533603
Query 114419 AGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGAC 114478
||||| | | | || | |||| ||| |||| ||| | || || | ||
Sbjct 533604 AGCTTCTTGAAGTCGTATGTGCG---CTCGGGGGTGACGTACATGTTGAGCGCCACGGAG 533660
Query 114479 GCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAA 114538
|| || || ||||| | ||| |||| ||||| || | || ||||| ||||
Sbjct 533661 GCTAGGTTGCACACGGCCACCTCGTCCTGGCTGGTGTATTCGACGATCTCCGTGCACAGG 533720
Query 114539 TTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTG 114598
|| | ||| |||||||||| ||||| || || ||| || || |||||||||
Sbjct 533721 TTGCTGCACTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTGCGATTGCATGCATCCTTG 533780
Query 114599 TAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCG 114658
|| |||||||| ||||| |||||||| || || |||| || || || | ||| || |
Sbjct 533781 TAGAGCATGTACGGCGTGCCCGTCTCTGTCTGAGACTCGATGATGGCGTACCACACCTGC 533840
Query 114659 GCGGCTGGCA-CAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTC 114717
|||| || || || ||| | || ||||||| ||| || |||||| | || ||
Sbjct 533841 TGGGCTTTCACCACCCGC-TTGACCCGGCCCTCCTTCTCATAGCGTGTGTACAAAGCCTC 533899
Query 114718 AAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCA 114777
|||||| |||||| | ||| || || || || || ||| || | ||| |||||
Sbjct 533900 AAACTCATCACCCCAGCACTCGTCCAGGCCAGGGCACTCATTTGGACACATGAGCGACCA 533959
Query 114778 TTGACCACCCT--CCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAG 114835
| || | ||| || | ||||||||| || ||||||||||||||| | ||||
Sbjct 533960 --GTCCTGGTTGCTCTCTACCCTCTTCATGAACAGATCTGGGATCCAGAGACCGAAGAAC 534017
Query 114836 AGATCCCGACAGCG-AGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCAT 114894
|| || || ||| ||| || | || || || || ||||| ||||| |
Sbjct 534018 AGGTCACGGGCGCGCTGCTCCTCTTTGCCTGTG-TTCTTCTTCAGCTCCAGGAAGTCGAA 534076
Query 114895 GATATCCGCGTGCCACGGTTCCAGGTACACCGCGA------TTGACCCCTTACGACGACC 114948
||| || ||||||||| |||||||||| |||| | || ||| | | ||
Sbjct 534077 GATGTCAAAGTGCCACGGCTCCAGGTACATGGCGAAGGCGCCGGGCCGCTT--GTTG-CC 534133
Query 114949 AGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATC 115008
|||||| || || | ||| ||| || | || || ||||| || | | || |
Sbjct 534134 TCCCTGGTCCACGTAGCGCGCCGTGTTGTTGTAGACACGCAGCATGGGCACCAGGCCGTT 534193
Query 115009 AGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGA--CATCATGGATGT 115064
|| | |||||| || || ||| || | | | ||| | || || | ||
Sbjct 534194 GGAGTTGCCATTGGTGCCGGCGATGTAGCTGCC--AGTGGAACGGATGCAGC--TGACCG 534249
Query 115065 GCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGA 115124
|| || || || |||||| | || ||||| | || |||| | |||| || ||||||
Sbjct 534250 CCACGCCGATGCCACCTGCCGATTTGGAGATGAGGGCACACTGCTTGAGCGTGTCGTAGA 534309
Query 115125 TCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCC--T 115182
| || ||||| ||| |||| | || | ||||||||||| |||| ||||||| |
Sbjct 534310 TGCCATCGATGCTGTCGTCCTTCATGGCTAGCAGGAAGCAGCTGGACAACTGTGGCCGGT 534369
Query 115183 TGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAAC 115225
||||| ||||||||||| || || |||| ||||| |||||
Sbjct 534370 TGGTG--CCAGCGTTGAAAAGAGTGGGTGAGGCGTGCGTGAAC 534410
>seq10769
Length=223
Score = 87.8 bits (96), Expect = 2e-12
Identities = 149/216 (69%), Gaps = 10/216 (5%)
Strand=Plus/Minus
Query 126086 TCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAA 126145
|| || || ||| || ||| ||||| | || || || |||||||||||||| | ||||
Sbjct 208 TCGTTTGAAAAGGTCAATCCGGGCATCAATCCACGTTTTTTCAACCAGAAAATAGAACAA 149
Query 126146 AATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAG 126205
|| | || || ||||| || ||||||||| || || |||| || || ||||||||
Sbjct 148 AAGGCCCCTGAAAAGAAAATGCCCTCCACAGCTGCAAAAGCAATCAGGCGTTCAGCAAA- 90
Query 126206 GAGCGCGACTTTGTG--TCAAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACG 126263
|||| ||| || | |||||| | ||||| | ||||| |||| |||| ||
Sbjct 89 -------ACTTGGTGATTCTATCCACTTTAAGGCCCAATCTGCCTTCTTCTTGATAGCCG 37
Query 126264 GGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTTTT 126299
| | | | || || | ||||||| |||||||
Sbjct 36 GAAAATTTTCAATGGCCTTAAAGAGTATATTCTTTT 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597074508931160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |