Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= NC_013085.1 Length=194454 Score E Sequences producing significant alignments: (Bits) Value seq19548 147 3e-30 >seq19548 Length=251 Score = 147 bits (162), Expect = 3e-30 Identities = 140/179 (78%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 6257 TATCACAGAGCGTTGCCTCTTGGCAATACTTCTTCAGGAAATACAAAGTTTTCATGTGGT 6316 ||| | || ||||| || | ||| ||||| || ||||| ||||||||||||||||||||| Sbjct 71 TATTAAAGGGCGTTTCCACGTGGTAATACCTCCTCAGGGAATACAAAGTTTTCATGTGGT 130 Query 6317 TGATCCACTGGTGCCATCCAGGCACGTAGACCTTCATTCAATAGGATGTTCTTGGTATAG 6376 ||||| || ||||||||| ||||| | |||||| || |||| || || || |||||| Sbjct 131 TGATCTTGTGCTGCCATCCATGCACGAATACCTTCGTTTAATAAAATATTTTTTGTATAG 190 Query 6377 AACGTCTCGAACTCTGGATCCTCCGCTGCTCTGATCTCTTGTGAAACAAAGTCATAAGC 6435 || || || || |||||||| || || || | | |||||||| |||||||| || || Sbjct 191 AATGTTTCAAATTCTGGATCTTCTGCAGCACGTAATTCTTGTGATACAAAGTCGTATGC 249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 621834135516880