Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq809 111 6e-19 seq1473 87.8 7e-12 >seq809 Length=886213 Score = 111 bits (122), Expect = 6e-19 Identities = 116/150 (77%), Gaps = 3/150 (2%) Strand=Plus/Minus Query 451320 ATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATG 451379 |||| || ||||| || ||||| || ||||||||| | ||||| || || || ||||||| Sbjct 477249 ATGCTGTTATTACGGTGCCCGCCTACTTCAATGATTCCCAACGCCAGGCTACAAAAGATG 477190 Query 451380 CAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTC 451439 ||||| || |||| | |||||||| || || || |||||||| || ||||||||| Sbjct 477189 CAGGAACAATCTCTGGGCTCAATGTTCTGCGTATCATCAATGAACCAACTGCAGCTGCTA 477130 Query 451440 TAGCATATGGACTAGGAAAATCAAAAGAAA 451469 | |||||||| || ||| || ||||| || Sbjct 477129 TCGCATATGG-CTTGGACAA--AAAAGTAA 477103 >seq1473 Length=2736273 Score = 87.8 bits (96), Expect = 7e-12 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || || || || |||||||| || || |||||||| ||||| | Sbjct 1454970 ATGCAGATTTTTGTGAAGACCCTTACTGGTAAGACCATCACTCTTGAGGTTGAGGACAGT 1455029 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||| | | ||| ||||| || || |||||||||||||| ||||||||| Sbjct 1455030 GACACGGTTGAGAATGTGAAAGCCAAAATCCAGGACAAGGAAGGAATTCCCCCTGATCAA 1455089 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGG 391207 || | || || || | || |||||| | |||||||| Sbjct 1455090 CAGAGGTTGATATTTGCTGGCAAACAATTAGAAGATGG 1455127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1974772242658716