Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08]
37,377 sequences; 493,775,940 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq227 271 1e-67
seq1298 269 3e-67
seq809 201 1e-46
seq768 159 4e-34
seq1138 143 3e-29
>seq227
Length=1344502
Score = 271 bits (300), Expect = 1e-67
Identities = 838/1286 (65%), Gaps = 28/1286 (2%)
Strand=Plus/Minus
Query 6874 GAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAAT 6933
||||||||| || ||||| ||||| || || || | || | ||| ||||| |
Sbjct 553866 GAAGATTTGCGTTTGCTTAGTGGGAATGGTGGTGTTGCGTTTGATGAGCGGCGTCATGAC 553807
Query 6934 ACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTG 6993
|| || || |||| || || |||||||| | |||||| | || | |||||| ||
Sbjct 553806 CCCTCCGGCGGTCTCGATGCCCAGTGACAGAGGCGCCACGTCGAGCAGCAGCAGGTCCTG 553747
Query 6994 AACAGATTCGTTCCCT------TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTA 7047
|| ||| || || ||||| | ||||||||| || || | ||| |||||
Sbjct 553746 GAC------GTTGCCCGAGGTGTCCCCCGTGAGGATGGCGGCCTGAACGGCCGCGCCGTA 553693
Query 7048 TGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGA 7107
|| |||||||| |||||||| || | |||||||| ||||| ||||| ||| | |||
Sbjct 553692 AGCCACCGCCTCGTCGGGGTTGATGCTCTTATTCAGCTCTTTGCCGTTGAAAAAGTCCCG 553633
Query 7108 TAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCAC 7167
| | | || ||| | || || ||||| || || || || | ||| | || | |
Sbjct 553632 CAGGAGCTTCTGGATTCTGGGAATCCGTGTGGAGCCGCCAACTAGAACCACGTCGTGGAT 553573
Query 7168 TTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACG 7227
| || || ||||| | ||| | || | ||| || || || |||| | | |
Sbjct 553572 CTGGCCCTTGTCCATCTTGGCGTCCCTCAGGGCTTTCTCCACCGGCTCCAGAGTTCCCCT 553513
Query 7228 GAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAAC 7287
||||| ||| ||||| |||||||| || || | ||| |||| || ||||| || |
Sbjct 553512 GAACAGGTCGGAGCACAGCTCCTCAAAGCGAGCCCTGGTGATGGCGGTGTAGAAGTCCAG 553453
Query 7288 GCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTT 7347
||| || | | || || || || | | | | || | | || || | ||| | |||
Sbjct 553452 GCCCTCAAAGAGGGAGTCGATCTCCACGTTGGCCTGGGAGCTGGAGGACAGCGTCCTCTT 553393
Query 7348 TGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTT 7407
|| | ||| || || || || | | | | ||| | | ||| | || |||||
Sbjct 553392 GGCCCTCTCGCAGGCGGTACGCAGCCTCCTCAAGGCCCTCTTGTTCTGGCCGATGTCTTT 553333
Query 7408 CTTATGTTTACGTTTAAACTCTTCAGAGAAGTG-TCGA--AGGAGTCTCGAATCGAAATC 7464
||| || || | || ||||| | ||||| || | | | | | || || ||
Sbjct 553332 CTTGTGCTTCCTCTTGAACTCGGCGACAAAGTGCTCCACCATGCGGTTG---TCAAAGTC 553276
Query 7465 TTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAAT 7524
|| || |||| ||||||||||| ||||| |||||||| || ||||| || || || ||
Sbjct 553275 CTCTCCGCCCAGATGTGTATCCCCTGCGGTGGCTTTGACCTCGAAGATGCCGCCCTCGAT 553216
Query 7525 GTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT-CGTAT 7583
| | | | || || || || || || || ||||||||||| ||||| | ||| |||
Sbjct 553215 GGTCAGGACGGACACGTCGAAGGTGCCGCCTCCCAGGTCAAAGATGAGGATGTTGCGTTC 553156
Query 7584 CGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAA 7643
|| || || || || |||||||| ||||| ||||||||||| || |||||||| |
Sbjct 553155 TCCCGACTGGCTT-TTGTCCAGACCGTAAGCGATGGCCGCCGCCGTGGGCTCATTAATGA 553097
Query 7644 TACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAAT 7703
| | || |||||| || || || |||||||||| || || || ||||| || |
Sbjct 553096 TCCTGAGGATGTTCAGTCCCGCGATGACACCCGCATCTTTGGTGGCCTGGCGTTGGGAGT 553037
Query 7704 CGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATT 7763
|||||||||| || ||||||||||| || ||| | || | ||| || || | ||
Sbjct 553036 CGTTAAAGTAAGCGGGGACCGTTACCACGGCGCTGGACACCCGTTGACCCAGGTAGGCTT 552977
Query 7764 CCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTT 7823
| || | || ||||||||| || ||||| || || |||||||| | || |
Sbjct 552976 CGGCCGTCTCCTTCATTTTGACCAGCACCATGGAGGAGATCTCTTCTGGGTAGAAGGCCT 552917
Query 7824 TCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCT 7883
|| || || || | |||| || | | || | | | ||| || ||||
Sbjct 552916 TCTCCTCCCCTTTGTGCTGCACTTGGATTTTCGCCTT---CCCTCCGTCGGCGACCACCT 552860
Query 7884 TATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAA 7943
| | | ||| | ||| | || |||| ||| | || ||| | |||||||| |
Sbjct 552859 TGAAGGGCCAGTGCTTCGTGTCCGCTTGCACCACCGGATCGTCGAACCTCCTTCCGATCA 552800
Query 7944 GACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGT 8003
| | ||| || ||||| || ||||| | ||||||| || ||||| || || ||||
Sbjct 552799 GTCTCTTGGCGTCAAACACCGTGTTGCTCGGGTTCAACGCCACCTGGTTTTTGGCGGCGT 552740
Query 8004 CCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGG-GTCGTTCGATTC 8062
| ||||| || | || | | || || ||||| || || | |||| || |||| ||
Sbjct 552739 CACCGATGAGCC--TC-TCTGTGTCGGTGAACGCCACATA-GCTGGGCGTGGTTCTGTTG 552684
Query 8063 CCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATAC 8122
|| |||||||| || || || || || | | | || | || || ||||| || |||
Sbjct 552683 CCCTGGTCGTTGGCGATGATCTCCACTTTGCCATGCTGGAAAACACCCACGCAGGAGTAC 552624
Query 8123 GTTGTTCCTAAATCAATACCGATTGC 8148
|| || || | || || ||||| ||
Sbjct 552623 GTGGTGCCCAGGTCGATGCCGATGGC 552598
Score = 271 bits (300), Expect = 1e-67
Identities = 838/1286 (65%), Gaps = 28/1286 (2%)
Strand=Plus/Plus
Query 6874 GAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAAT 6933
||||||||| || ||||| ||||| || || || | || | ||| ||||| |
Sbjct 589543 GAAGATTTGCGTTTGCTTAGTGGGAATGGTGGTGTTGCGTTTGATGAGCGGCGTCATGAC 589602
Query 6934 ACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTG 6993
|| || || |||| || || |||||||| | |||||| | || | |||||| ||
Sbjct 589603 CCCTCCGGCGGTCTCGATGCCCAGTGACAGAGGCGCCACGTCGAGCAGCAGCAGGTCCTG 589662
Query 6994 AACAGATTCGTTCCCT------TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTA 7047
|| ||| || || ||||| | ||||||||| || || | ||| |||||
Sbjct 589663 GAC------GTTGCCCGAGGTGTCCCCCGTGAGGATGGCGGCCTGAACGGCCGCGCCGTA 589716
Query 7048 TGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGA 7107
|| |||||||| |||||| | || | |||||||| ||||| ||||| ||| | |||
Sbjct 589717 AGCCACCGCCTCGTCGGGGGTGATGCTCTTATTCAGCTCTTTGCCGTTGAAAAAGTCCCG 589776
Query 7108 TAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCAC 7167
| | | || ||| | || || ||||| || || || || | ||| | || | |
Sbjct 589777 CAGGAGCTTCTGGATTCTGGGAATCCGTGTGGAGCCGCCAACTAGAACCACGTCGTGGAT 589836
Query 7168 TTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACG 7227
| || || ||||| | ||| | || | ||| || || || |||| | | |
Sbjct 589837 CTGGCCCTTGTCCATCTTGGCGTCCCTCAGGGCTTTCTCCACCGGCTCCAGAGTTCCCCT 589896
Query 7228 GAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAAC 7287
||||| ||| ||||| |||||||| || || | ||| |||| || ||||| || |
Sbjct 589897 GAACAGGTCGGAGCACAGCTCCTCAAAGCGAGCCCTGGTGATGGCGGTGTAGAAGTCCAG 589956
Query 7288 GCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTT 7347
||| || | | || || || || | | | | || | | || || | ||| | |||
Sbjct 589957 GCCCTCAAAGAGGGAGTCGATCTCCACGTTGGCCTGGGAGCTGGAGGACAGCGTCCTCTT 590016
Query 7348 TGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTT 7407
|| | ||| || || || || | | | | ||| | | ||| | || |||||
Sbjct 590017 GGCCCTCTCGCAGGCGGTACGCAGCCTCCTCAAGGCCCTCTTGTTCTGGCCGATGTCTTT 590076
Query 7408 CTTATGTTTACGTTTAAACTCTTCAGAGAAGTG-TCGA--AGGAGTCTCGAATCGAAATC 7464
||| || || | || ||||| | ||||| || | | | | | || || ||
Sbjct 590077 CTTGTGCTTCCTCTTGAACTCGGCGACAAAGTGCTCCACCATGCGGTTG---TCAAAGTC 590133
Query 7465 TTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAAT 7524
|| || |||| ||||||||||| ||||| |||||||| || ||||| || || || ||
Sbjct 590134 CTCTCCGCCCAGATGTGTATCCCCGGCGGTGGCTTTGACCTCGAAGATGCCGCCCTCGAT 590193
Query 7525 GTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT-CGTAT 7583
| | | | || || || || || || || ||||||||||| ||||| | ||| |||
Sbjct 590194 GGTCAGGACGGACACGTCGAAGGTGCCGCCTCCCAGGTCAAAGATGAGGATGTTGCGTTC 590253
Query 7584 CGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAA 7643
|| || || || || |||||||| ||||| ||||||||||| || |||||||| |
Sbjct 590254 TCCCGACTGGCTT-TTGTCCAGACCGTAAGCGATGGCCGCCGCCGTGGGCTCATTAATGA 590312
Query 7644 TACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAAT 7703
| | || |||||| || || || |||||||||| || || || ||||| || |
Sbjct 590313 TCCTGAGGATGTTCAGTCCCGCGATGACACCCGCATCTTTGGTGGCCTGGCGTTGGGAGT 590372
Query 7704 CGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATT 7763
|||||||||| || ||||||||||| || ||| | || | ||| || || | ||
Sbjct 590373 CGTTAAAGTAAGCGGGGACCGTTACCACGGCGCTGGACACCCGTTGACCCAGGTAGGCTT 590432
Query 7764 CCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTT 7823
| || | || ||||||||| || ||||| || || |||||||| | || |
Sbjct 590433 CGGCCGTCTCCTTCATTTTGACCAGCACCATGGAGGAGATCTCTTCTGGGTAGAAGGCCT 590492
Query 7824 TCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCT 7883
|| || || || | |||| || | | || | | | ||| || ||||
Sbjct 590493 TCTCCTCCCCTTTGTGCTGCACTTGGATTTTCGCCTT---CCCTCCGTCGGCGACCACCT 590549
Query 7884 TATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAA 7943
| | | ||| | ||| | || |||| ||| | || ||| | |||||||| |
Sbjct 590550 TGAAGGGCCAGTGCTTCGTGTCCGCTTGCACCACCGGATCGTCGAACCTCCTTCCGATCA 590609
Query 7944 GACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGT 8003
| | ||| || ||||| || ||||| | ||||||| || |||||||| || ||||
Sbjct 590610 GTCTCTTGGCGTCAAACACCGTGTTGCTCGGGTTCAACGCCACCTGGTTCTTGGCGGCGT 590669
Query 8004 CCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGG-GTCGTTCGATTC 8062
| ||||| || | || | | || || ||||| || || | |||| || |||| ||
Sbjct 590670 CACCGATGAGCC--TC-TCTGTGTCGGTGAACGCCACATA-GCTGGGCGTGGTTCTGTTG 590725
Query 8063 CCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATAC 8122
|| |||||||| || || || || || | | | || | || || ||||| || |||
Sbjct 590726 CCCTGGTCGTTGGCGATGATCTCCACTTTGCCATGCTGGAAAACACCCACGCAGGAGTAC 590785
Query 8123 GTTGTTCCTAAATCAATACCGATTGC 8148
|| || || | || || ||||| ||
Sbjct 590786 GTGGTGCCCAGGTCGATGCCGATGGC 590811
Score = 266 bits (294), Expect = 4e-66
Identities = 837/1286 (65%), Gaps = 28/1286 (2%)
Strand=Plus/Plus
Query 6874 GAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAAT 6933
||||||||| || ||||| ||||| || || || | || | ||| ||||| |
Sbjct 569213 GAAGATTTGCGTTTGCTTAGTGGGAATGGTGGTGTTGCGTTTGATGAGCGGCGTCATGAC 569272
Query 6934 ACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTG 6993
|| || || |||| || || |||||||| | |||||| | || | |||||| ||
Sbjct 569273 CCCTCCGGCGGTCTCGATGCCCAGTGACAGAGGCGCCACGTCGAGCAGCAGCAGGTCCTG 569332
Query 6994 AACAGATTCGTTCCCT------TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTA 7047
|| ||| || || ||||| | ||||||||| || || | ||| |||||
Sbjct 569333 GAC------GTTGCCCGAGGTGTCCCCCGTGAGGATGGCGGCCTGAACGGCCGCGCCGTA 569386
Query 7048 TGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGA 7107
|| |||||||| |||||| | || | |||||||| ||||| ||||| ||| | |||
Sbjct 569387 AGCCACCGCCTCGTCGGGGGTGATGCTCTTATTCAGCTCTTTGCCGTTGAAAAAGTCCCG 569446
Query 7108 TAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCAC 7167
| | | || ||| | || || ||||| || || || || | ||| | || | |
Sbjct 569447 CAGGAGCTTCTGGATTCTGGGAATCCGTGTGGAGCCGCCAACTAGAACCACGTCGTGGAT 569506
Query 7168 TTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACG 7227
| || || ||||| | ||| | || | ||| || || || |||| | | |
Sbjct 569507 CTGGCCCTTGTCCATCTTGGCGTCCCTCAGGGCTTTCTCCACCGGCTCCAGAGTTCCCCT 569566
Query 7228 GAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAAC 7287
||||| ||| ||||| |||||||| || || | ||| |||| || ||||| || |
Sbjct 569567 GAACAGGTCGGAGCACAGCTCCTCAAAGCGAGCCCTGGTGATGGCGGTGTAGAAGTCCAG 569626
Query 7288 GCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTT 7347
||| || | | || || || || | | | | || | | || || | ||| | |||
Sbjct 569627 GCCCTCAAAGAGGGAGTCGATCTCCACGTTGGCCTGGGAGCTGGAGGACAGCGTCCTCTT 569686
Query 7348 TGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTT 7407
|| | ||| || || || || | | | | ||| | | ||| | || |||||
Sbjct 569687 GGCCCTCTCGCAGGCGGTACGCAGCCTCCTCAAGGCCCTCTTGTTCTGGCCGATGTCTTT 569746
Query 7408 CTTATGTTTACGTTTAAACTCTTCAGAGAAGTG-TCGA--AGGAGTCTCGAATCGAAATC 7464
||| || || | || ||||| | ||||| || | | | | | || || ||
Sbjct 569747 CTTGTGCTTCCTCTTGAACTCGGCGACAAAGTGCTCCACCATGCGGTTG---TCAAAGTC 569803
Query 7465 TTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAAT 7524
|| || |||| ||||||||||| ||||| |||||||| || ||||| || || || ||
Sbjct 569804 CTCTCCGCCCAGATGTGTATCCCCGGCGGTGGCTTTGACCTCGAAGATGCCGCCCTCGAT 569863
Query 7525 GTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT-CGTAT 7583
| | | | || || || || || || || |||||||| || ||||| | ||| |||
Sbjct 569864 GGTCAGGACGGACACGTCGAAGGTGCCGCCGCCCAGGTCGAAGATGAGGATGTTGCGTTC 569923
Query 7584 CGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAA 7643
|| || || || || |||||||| ||||| ||||||||||| || |||||||| |
Sbjct 569924 TCCCGACTGGCTT-TTGTCCAGACCGTAAGCGATGGCCGCCGCCGTGGGCTCATTAATGA 569982
Query 7644 TACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAAT 7703
| | || |||||| || || || |||||||||| || || || ||||| || |
Sbjct 569983 TCCTGAGGATGTTCAGTCCCGCGATGACACCCGCATCTTTGGTGGCCTGGCGTTGGGAGT 570042
Query 7704 CGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATT 7763
|||||||||| || ||||||||||| || ||| | || | ||| || || | ||
Sbjct 570043 CGTTAAAGTAAGCGGGGACCGTTACCACGGCGCTGGACACCCGTTGACCCAGGTAGGCTT 570102
Query 7764 CCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTT 7823
| || | || ||||||||| || ||||| || || |||||||| | || |
Sbjct 570103 CGGCCGTCTCCTTCATTTTGACCAGCACCATGGAGGAGATCTCTTCTGGGTAGAAGGCCT 570162
Query 7824 TCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCT 7883
|| || || || | |||| || | | || | | | ||| || ||||
Sbjct 570163 TCTCCTCCCCTTTGTGCTGCACTTGGATTTTCGCCTT---CCCTCCGTCGGCGACCACCT 570219
Query 7884 TATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAA 7943
| | | ||| | ||| | || |||| ||| | || ||| | |||||||| |
Sbjct 570220 TGAAGGGCCAGTGCTTCGTGTCCGCTTGCACCACCGGATCGTCGAACCTCCTTCCGATCA 570279
Query 7944 GACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGT 8003
| | ||| || ||||| || ||||| | ||||||| || ||||| || || ||||
Sbjct 570280 GTCTCTTGGCGTCAAACACCGTGTTGCTCGGGTTCAACGCCACCTGGTTTTTGGCGGCGT 570339
Query 8004 CCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGG-GTCGTTCGATTC 8062
| ||||| || | || | | || || ||||| || || | |||| || |||| ||
Sbjct 570340 CACCGATGAGCC--TC-TCTGTGTCGGTGAACGCCACATA-GCTGGGCGTGGTTCTGTTG 570395
Query 8063 CCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATAC 8122
|| |||||||| || || || || || | ||| || | || || ||||| || |||
Sbjct 570396 CCCTGGTCGTTGGCGATGATCTCCACTTTGCCGTGCTGGAAAACACCCACGCAGGAGTAC 570455
Query 8123 GTTGTTCCTAAATCAATACCGATTGC 8148
|| || || | || || ||||| ||
Sbjct 570456 GTGGTGCCCAGGTCGATGCCGATGGC 570481
>seq1298
Length=9711636
Score = 269 bits (298), Expect = 3e-67
Identities = 1023/1588 (64%), Gaps = 22/1588 (1%)
Strand=Plus/Minus
Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628
||||| ||| |||| ||||||| || || | |||||||| || || || |||||
Sbjct 333891 TCATCCTCAGCTTTGTACTTTTGGGCGTCGTCCACCATCTTCTCGATCTCCTCTTTGCTC 333832
Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688
| | || || || || || || || ||||| | || || | | ||| | | ||
Sbjct 333831 AGACGGCCTTTGTCGTTGGTGATGGTGATCTTGTTCTCCTTGCCGGTG--CTTTTGTCCA 333774
Query 6689 GCACTTACA--TTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTG 6746
| || ||| ||||| |||||||| || || || ||||| | || | || || ||
Sbjct 333773 CCGCTGACACGTTCAAGATACCATTGGCGTCCACGTCGAAGGTGACCTCGATCTGCGGCA 333714
Query 6747 TACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCG 6806
|| | ||| || | || || || ||| ||||||| | || || | |||| |||
Sbjct 333713 CGCCTCGCGGGGCCGGCGGGATTCCGCTTAGATCAAATTTTCCCAGCAGGTTGTTGTCCT 333654
Query 6807 TCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTG 6866
| | | | | || || ||| |||| | ||| || | || || || ||
Sbjct 333653 TGGTCATGGCTCTCTCGCCCTCAAAGACCTGAATGAGGACACCCGGCTGGTTGTCGGCAT 333594
Query 6867 CCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGG 6926
|| |||||| || | ||| | || || || || || | || | || |
Sbjct 333593 AGGTGCTGAAGATCTGCGTCTGCTTGGTGGGGATGGTGGTGTTGCGTTTGATGAGCGACG 333534
Query 6927 TCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACA 6986
|||| | || || || |||| ||||| |||| ||| | |||||||| || | |
Sbjct 333533 TCATGACTCCTCCGGCTGTCTCGATCCCAAGCGACAAAGGCGCCACGTCCAGCAGCAGGA 333474
Query 6987 GGTCTTGAACAGATTCGTTCCCT-TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCG 7045
|||| || || | ||| | || || || | ||||||||| ||||||| || |||
Sbjct 333473 GGTCCTGGAC-GTTTCCCGAGGTGTCCCCAGTGAGGATGGCGGCCTGGACCGCGGCGCCG 333415
Query 7046 TATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCC 7105
|| || |||||||| || || ||||| | || |||||||| || ||||||||| | ||
Sbjct 333414 TAAGCCACCGCCTCGTCTGGATTAATGCTCTTGTTCAGTTCCTTGCCGTTAAAAAAGTCT 333355
Query 7106 GATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTC 7165
| | | ||| ||| | ||||| || || || || || |||| || | || |
Sbjct 333354 TGCAGTAGCTTTTGGATTCTGGGGATCCGGGTGGAGCCCCCAACCAGGACCACGTCGTGG 333295
Query 7166 ACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTA 7225
| | || || ||||| | ||| || | ||| || || || |||| | |
Sbjct 333294 ATCTGGCCCTTGTCCATCTTGGCGTCCTTCAGCGCTTTCTCCACTGGCTCCAGAGTTCCC 333235
Query 7226 CGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCA 7285
| ||||| ||| ||||| ||||| || || || | ||| ||||| || ||||| ||
Sbjct 333234 CTGAACAGGTCTGAGCACAGCTCCTCGAAGCGAGCCCTGGTGATGGAAGTGTAGAAGTCC 333175
Query 7286 ACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGC 7345
||||| || | | || || || || ||| | | || | | || || | ||| | |
Sbjct 333174 ACGCCCTCAAAGAGAGAGTCGATCTCGATGTTGGCCTGGGAGCTGGAGGACAGCGTCCTC 333115
Query 7346 TTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCT 7405
||||| | ||| || || || || | | | | ||| | ||| | || ||
Sbjct 333114 TTTGCCCTCTCGCAGGCGGTGCGCAGCCTCCTCAAGGCCCTTTTGTTCTGGCCGATGTCC 333055
Query 7406 TTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTG-TCGA--AGGAGTCTCGAATCGAAA 7462
|| || || || | || ||||| | ||||| || | | | | | || ||
Sbjct 333054 TTTTTGTGCTTCCTCTTGAACTCGGCCACAAAGTGCTCCACCATGCGGTTG---TCAAAG 332998
Query 7463 TCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCA 7522
|| || || |||| ||| || || || ||||| |||||||| |||||||| || || ||
Sbjct 332997 TCCTCCCCGCCCAGGTGCGTGTCTCCGGCGGTGGCTTTGACCTCAAAGATGCCGCCCTCG 332938
Query 7523 ATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT-CGT 7581
||| | | | || || || || || || || |||||||||||||| || ||||| |||
Sbjct 332937 ATGGTCAGGATGGACACGTCGAAGGTGCCGCCGCCCAGGTCAAAAATAAGGACGTTGCGT 332878
Query 7582 ATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAAT 7641
|| || || | || || || || || ||||| || ||||| || || || || ||
Sbjct 332877 TCCGCCGA-TTGGCCTTTGTCCAGGCCATAGGCGATGGCTGCCGCTGTGGGCTCGTTGAT 332819
Query 7642 AATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGA 7701
|| | || |||||| ||||| || |||||||||| || || || || || ||
Sbjct 332818 GATCCTCAGGATGTTCAGTCCAGCGATGACGCCCGCATCTTTGGTGGCCTGCCGCTGGGA 332759
Query 7702 ATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGA 7761
|||||||||||||| |||||||| || || |||| | || | ||| || || |
Sbjct 332758 GTCGTTAAAGTAGGCGGGGACCGTGACCACGGCGTTGGATACCCGTTGACCCAGGTAGGC 332699
Query 7762 TTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTG 7821
||| || || || |||||||| || ||||| || || ||||| || | ||
Sbjct 332698 TTCTGCAATCTCCTTCATTTTAACCAGCACCATGGAGGAGATCTCCTCTGGGTTGAAGGC 332639
Query 7822 TTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAAC 7881
||| || || || | | || | || ||| || || | || | | || ||
Sbjct 332638 CTTCTCGTCCCCTTTGTACTGCACCTGGATTTTGGCCTT-GCCTC--CATCAGCGACTAC 332582
Query 7882 CTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGAT 7941
||| | | ||||| ||| | || ||||||| | || |||| | ||||||||
Sbjct 332581 CTTGAAGGGCCAATGCTTCCTGTCTGCTTGGACGACAGGATCGTCAAACCTCCTTCCGAT 332522
Query 7942 AAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGC 8001
|| ||||| || ||||| || ||||| ||||||||| || |||||| || || ||
Sbjct 332521 CAGTCGCTTGGCGTCAAACACAGTGTTGCTGGGGTTCAACGCCACTTGGTTTTTGGCGGC 332462
Query 8002 GTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGG-GTCGTTCGAT 8060
||| ||||| || | || | | || || ||||| ||||| | |||| || || | |
Sbjct 332461 GTCGCCGATGAGCC--TC-TCGGTGTCGGTGAACGCCACGTA-GCTGGGTGTGGTCCTGT 332406
Query 8061 TCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAAT 8120
| || |||||||| || || || || || | | | || | || || ||||| || |
Sbjct 332405 TGCCCTGGTCGTTGGCGATGATCTCCACTTTGCCATGCTGGAAAACACCCACGCAGGAGT 332346
Query 8121 ACGTTGTTCCTAAATCAATACCGATTGC 8148
|||| || || | || || ||||||||
Sbjct 332345 ACGTGGTGCCCAGGTCGATGCCGATTGC 332318
>seq809
Length=886213
Score = 201 bits (222), Expect = 1e-46
Identities = 372/543 (69%), Gaps = 6/543 (1%)
Strand=Plus/Plus
Query 7040 GCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAA 7099
||||| || || || || ||||| ||||| || |||| ||||| ||||| || || ||
Sbjct 475968 GCCCCATAGGCAACAGCTTCATCTGGGTTGATGCTTTTGTTCAGCTCTTTGCCATTGAAG 476027
Query 7100 TAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATT 7159
| ||| | || | ||| ||||| ||||| || || || || || ||||| || ||
Sbjct 476028 AAGTCCTGCAGCAGCTTTTGGATTTTGGGGATGCGAGTGGAGCCGCCAACCAAGACAATG 476087
Query 7160 TCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATA 7219
|||| | | | ||| || ||||| | || || |||| ||| || || || ||||
Sbjct 476088 TCATGAATTAGCCCTTTGTCCATCTTGGCATCACGCAGTGATTTCTCCACGGGGTCCAAG 476147
Query 7220 CATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG 7279
|||||| | ||| | ||||||||||| || || | ||| ||||| || |||
Sbjct 476148 GTCCCACGGAAGAGGTCAGCATTGAGTTCCTCAAAGCGAGCTCTGGTGATGGAGGTGTAG 476207
Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC 7339
|||||||| || || || | || ||||||||||| | | || | | ||||| ||
Sbjct 476208 AAATCAACTCCCTCATACAGAGAGTCAATTTCAATACTGGCCTGAGTGCTGGAAGACAAG 476267
Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399
|| |||||||| | ||| || || || || | |||||| | ||| ||| ||| |
Sbjct 476268 GTGCGCTTTGCCCTCTCGCATGCTGTGCGCAGACGACGCACGGCTCGCTTGTTGTCACTG 476327
Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGT-GTCGA--AGGAGTCTCGAA 7456
|| |||||||| | || || || ||||| || ||||| || || | | | |
Sbjct 476328 ATGTCTTTCTTGTACTTGCGCTTGAACTCCGCAATGAAGTGGTTGACCATGCGGTT---G 476384
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|| |||||||| ||||| | || ||||| || || || | || || |||||||| ||
Sbjct 476385 TCAAAATCTTCCCCACCAAGATGGGTATCGCCAGCTGTGGACTTAACCTCAAAGATTCCA 476444
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
||||||| | || | || |||||||| || ||||| || || ||||| || || ||
Sbjct 476445 TCTTCAATTGTCAAAATTGACACATCAAAGGTGCCACCCCCAAGATCAAAGATAAGCACA 476504
Query 7577 TTC 7579
|||
Sbjct 476505 TTC 476507
Score = 93.3 bits (102), Expect = 5e-14
Identities = 92/119 (77%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 7607 CCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCA 7666
|| || |||||||| || || ||||||||||| || ||||| ||| || || ||||
Sbjct 477120 CCATATGCGATAGCAGCTGCAGTTGGTTCATTGATGATACGCAGAACATTGAGCCCAGAG 477179
Query 7667 ATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGT 7725
|| ||| | |||||||| || || || ||||| ||||| || |||||||| || |||||
Sbjct 477180 ATTGTTCCTGCATCTTTTGTAGCCTGGCGTTGGGAATCATTGAAGTAGGCGGGCACCGT 477238
>seq768
Length=2716662
Score = 159 bits (176), Expect = 4e-34
Identities = 361/540 (67%), Gaps = 2/540 (0%)
Strand=Plus/Minus
Query 7040 GCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAA 7099
|| ||||| || || ||||| ||||| || || | || |||| ||| || || || |||
Sbjct 1220346 GCGCCGTAGGCCACTGCCTCGTCGGGATTGATGCTCTTGTTCAATTCCTTCCCATTGAAA 1220287
Query 7100 TAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATT 7159
| ||| | || | || || || || || || || || || || || | ||||||
Sbjct 1220286 AAGTCCTTCAGCAGCTTCTGGATCTTGGGAATGCGAGTGGAGCCTCCCACTAGGACGATT 1220227
Query 7160 TCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATA 7219
|| | | ||| ||||| | ||| | ||| || |||| ||| || || |||||||
Sbjct 1220226 TCGTGGATGGCCGACTTATCCAGCTTGGCGTCACGCAGTGATTTCTCCACGGGTTCCAGG 1220167
Query 7220 CATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG 7279
||||||| || || |||||||| || || | ||| || || ||||||
Sbjct 1220166 GTGCCGCGGAACAGATCTCCGTTGAGCTCCTCAAAGCGGGCCCTGGTGATCGAGGTATAG 1220107
Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC 7339
|| || | ||| ||| | | ||| || || || | | | | || | | ||||| |||
Sbjct 1220106 AAGTCGATGCCCTCGAAGAGCGAGTCGATCTCGACGCTGGCCTGCGAGCTGGAAGACAAC 1220047
Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399
|| ||||| || ||||| |||||||| || | || || | ||| || ||| ||
Sbjct 1220046 GTGCGCTTGGCCCGCTCGCACGCCGTGCGCAGGCGCCGCACGGCTCGTTTGTTGTCGCTG 1219987
Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTG-TCGAAGGAGTCTCGAATC 7458
|| || ||||| || || || || ||||| | |||||| | || || | ||
Sbjct 1219986 ATGTCCTTCTTGTGCTTGCGCTTGAACTCGGCGATGAAGTGGTTGACCAAG-CGGTTGTC 1219928
Query 7459 GAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCC 7518
|| || || || |||| || || || ||||| || | ||||| |||||||| || |
Sbjct 1219927 AAAGTCCTCGCCGCCCAGATGAGTGTCACCCGCCGTTGACTTGACCTCAAAGATGCCATC 1219868
Query 7519 TTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT 7578
|||||| || | || |||||||| || || |||||||||||||| ||||| || ||
Sbjct 1219867 CTCAATGGCCAAGATGGACACATCAAAGGTGCCGCCACCCAGGTCAAAGATGAGGACATT 1219808
>seq1138
Length=1540511
Score = 143 bits (158), Expect = 3e-29
Identities = 358/542 (66%), Gaps = 4/542 (1%)
Strand=Plus/Plus
Query 7039 CGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAA 7098
||| ||||| || ||||||||||| ||||| || | ||||| || || ||||| ||
Sbjct 98710 CGCTCCGTAGGCCACCGCCTCATCAGGGTTGATGCTCTTATTGAGCTCACGGCCGTTGAA 98769
Query 7099 ATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGAT 7158
| ||| | | | ||| || || ||||| || || || ||||| |||| || ||
Sbjct 98770 GAAGTCCTGCAGAAGCTTTTGGATCTTGGGGATACGAGTGGAGCCACCCACCAGGACAAT 98829
Query 7159 TTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCAT 7218
|| | | | | ||||| ||||| | ||| | || | || || || || ||||
Sbjct 98830 ATCCTGGATCTGGGCCTTATCCATCTTGGCGTCCCTCAGGGCCTTCTCCACGGGCTCCAG 98889
Query 7219 ACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATA 7278
| ||||||| || | |||||||||||||| || | ||| |||||||| ||
Sbjct 98890 GGTTCCGCGGAACAGATCAGCATTGAGTTCCTCAAAACGAGCTCTGGTGATGGATGTGTA 98949
Query 7279 GAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTG--TTTGTGCCGTCGAAGAT 7336
||| || || ||||| | ||| || || |||||| | | | |||| | | ||
Sbjct 98950 GAAGTCGGTTCCTTCGTAGAGCGAGTCGATCTCAATGCTGGCCTGGGTGCTGCTG--GAG 99007
Query 7337 AACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCG 7396
| || ||||| || ||||| || || || || | ||||| | || || ||| |
Sbjct 99008 AGGGTGCGCTTGGCACGCTCGCAGGCGGTGCGCAGGCGACGCACCGCTCGTTTGTTGGTG 99067
Query 7397 GAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAA 7456
|| || || || ||| || || ||||| || |||||| | | |||
Sbjct 99068 TTGATTTCCTTTTTGAATTTGCGCTTGAACTCGCCAATGAAGTGATTCACCATTCTGTTG 99127
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|| || |||||||| |||||||| || || ||||| || | ||||| || ||||| ||
Sbjct 99128 TCAAAGTCTTCACCGCCCAAGTGAGTGTCACCCGCAGTGGACTTGACCTCGAAGATGCCA 99187
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
| |||||| | | | || ||||| || || || || || |||||||| || || |||
Sbjct 99188 TCCTCAATGGTCAGAATGGACACATCGAAAGTGCCTCCCCCGAGGTCAAAGATCAGGACG 99247
Query 7577 TT 7578
||
Sbjct 99248 TT 99249
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 634836058016680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |