Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08]
37,377 sequences; 493,775,940 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq1148 136 5e-27
seq1247 93.3 5e-14
>seq1148
Length=2189075
Score = 136 bits (150), Expect = 5e-27
Identities = 547/849 (64%), Gaps = 43/849 (5%)
Strand=Plus/Plus
Query 106478 TTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAA 106537
||||| || ||| ||| |||| ||||| || | || || || |||| ||||
Sbjct 533667 TTGCACACGGCCACCTCGTCCTGGCTGGTGTATTCGACGATCTCCGTGCACAGGTTGCTG 533726
Query 106538 CTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGC 106597
| ||| || || |||| |||| ||||| ||||| ||||| |||||||||||||||
Sbjct 533727 CACTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTGCGATTGCATGCATCCTTGTAGAGC 533786
Query 106598 ATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACACATCGGCGGCT 106657
||||| ||||| |||||||| ||||| |||| || || || | |||||| | ||||
Sbjct 533787 ATGTACGGCGTGCCCGTCTCTGTCTGAGACTCGATGATGGCGTACCACACCTGCTGGGCT 533846
Query 106658 GGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCC 106717
|| | ||| |||| |||||| ||| || |||||| | || ||||||||
Sbjct 533847 TTCACCACCCGCTTGACCCGGCCCTCCTTCTCATAGCGTGTGTACAAAGCCTCAAACTCA 533906
Query 106718 TCACCCACCGC-GTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACC 106776
|||||| | || ||| || || || || | |||||| | || ||||| | ||
Sbjct 533907 TCACCC-CAGCACTCGTCCAGGCCAGGGCACTCATTTGGACACATGAGCGACCA--GTCC 533963
Query 106777 ACCCT--CCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCT 106834
| ||| |||| ||||||||| || ||||| ||||| || | || || ||
Sbjct 533964 TGGTTGCTCTCTACCCTCTTCATGAACAGATCTGGGATCCAGAGACCGAAGAACAGGTCA 534023
Query 106835 CTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGT-AACTCAAGGAACTCCATGATATC 106893
| || ||| || | ||| ||| || | | ||| ||||| || | ||| ||
Sbjct 534024 CGGGCGCGCTGCTCCTCTTTGCCTGTGTT-CTTCTTCAGCTCCAGGAAGTCGAAGATGTC 534082
Query 106894 CGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC------CTT-TCGACGCCCAGCTT 106946
|||||| ||||| || || | |||| | || ||| | | | ||| |
Sbjct 534083 AAAGTGCCACGGCTCCAGGTACATGGCGAAGGCGCCGGGCCGCTTGTTGCCTCCC----T 534138
Query 106947 GATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATT 107006
| | || |||||||| ||| ||| | || || ||||| || | | || | || |
Sbjct 534139 GGTCCACGTAGCGCGCCGTGTTGTTGTAGACACGCAGCATGGGCACCAGGCCGTTGGAGT 534198
Query 107007 GACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCA---CATC--ATGGATGTG--- 107058
||||| || || | ||| || ||| || | | ||| | ||
Sbjct 534199 TGCCATTGGTGCC-------GGCGATGTA---GCTGCCAGTGGAACGGATGCAGCTGACC 534248
Query 107059 --CATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAG 107116
|| || || || || ||| | || ||||| | ||||||| | | || || | |||
Sbjct 534249 GCCACGCCGATGCCACCTGCCGATTTGGAGATGAGGGCACACTGCTTGAGCGTGTCGTAG 534308
Query 107117 ATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTC-- 107174
|| || | ||| ||| ||||| |||| | |||||||| ||||||| ||| || |
Sbjct 534309 ATGCCATCGATGCTGTCGTCCTTCATGGCTAGCAGGAAGCAGCTGGACAACTGTGGCCGG 534368
Query 107175 TTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCT 107234
|||||| ||||| ||||| || || |||| ||||| ||||| | | || | |
Sbjct 534369 TTGGTG--CCAGCGTTGAAAAGAGTGGGTGAGGCGTGCGTGAACCATCTCTCTGAAAGCA 534426
Query 107235 TGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCA 107294
|| ||| ||||| | | | | ||| | | | ||||||||||| | ||||| ||||
Sbjct 534427 GGTTGTACGTCTCAATGGCGGCATCCACGCGCGCGCCGTGGATGCCCACCGCCACCCGCA 534486
Query 107295 TAAACATGT 107303
| | |||||
Sbjct 534487 TCAGCATGT 534495
>seq1247
Length=1231281
Score = 93.3 bits (102), Expect = 5e-14
Identities = 102/136 (75%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 117293 CCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTTCT 117352
|||| || ||| || || || || ||| || ||||| |||||||| || | ||||
Sbjct 216350 CCTCGTCCCGGCTGATGAGCTCGTTGGAGTAGGTGAGGCCGGGCATGAGGCCTCTTTTCT 216409
Query 117353 TCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAACG 117412
||||||| || || ||| ||| || |||||||||||||| |||||||| ||||| |
Sbjct 216410 TCAACCAGTAGATGGCGGCGAAGGAGCCGGAGAAGAAGATGCCCTCCACCGCTGCAAAAG 216469
Query 117413 CAAAAAGGCGCTCGGC 117428
| | ||| ||||||||
Sbjct 216470 CCACAAGTCGCTCGGC 216485
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589705153595480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |