Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= NC_015281.1 Length=179563 Score E Sequences producing significant alignments: (Bits) Value seq19548 114 1e-20 >seq19548 Length=251 Score = 114 bits (126), Expect = 1e-20 Identities = 111/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 170177 GCAGCAGAAGATCCAGAATTTGAGACCTTCTACACCAAAAACATCCTATTGAATGAAGGA 170236 || |||||||||||||||||||| || ||||| || ||||| || |||| || ||||| Sbjct 219 GCTGCAGAAGATCCAGAATTTGAAACATTCTATACAAAAAATATTTTATTAAACGAAGGT 160 Query 170237 CTTCGTGCATGGTTGGCACCTGCTGATCAACCACATGAAAACTTCATCTTCCCAGAAGAA 170296 ||||||||||| ||||| | |||||||||||||||||||| | ||||| || || Sbjct 159 ATTCGTGCATGGATGGCAGCACAAGATCAACCACATGAAAACTTTGTATTCCCTGAGGAG 100 Query 170297 GTTCTTCCGAGAGGTAACGCACT 170319 || | || | || ||||| || Sbjct 99 GTATTACCACGTGGAAACGCCCT 77 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 574205198753160