Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= NC_015285.1 Length=174285 Score E Sequences producing significant alignments: (Bits) Value seq19548 105 7e-18 >seq19548 Length=251 Score = 105 bits (116), Expect = 7e-18 Identities = 134/182 (74%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 164459 GTGCTTACGATTTTGTAAGTCAAGAGATTA-GAGCAGCAGAAGATCCTGAGTTCGAGACT 164517 |||| ||||| |||||| ||||| |||| | || ||||||||||| || || || || Sbjct 251 GTGCATACGACTTTGTATCACAAGA-ATTACGTGCTGCAGAAGATCCAGAATTTGAAACA 193 Query 164518 TTCTATACCAAGAACATCTTATTGAACGAAGGACTCCGTGCATGGTTAGCACCAGTTGAC 164577 |||||||| || || || ||||| |||||||| | ||||||||| | ||| || || Sbjct 192 TTCTATACAAAAAATATTTTATTAAACGAAGGTATTCGTGCATGGATGGCAGCACAAGAT 133 Query 164578 CAGCCAGGAGAACGGTTTGTCTTCCCAGAAGAAGTACTGCCGAGAGGTAATGCGCTTTAA 164637 || ||| ||| ||||| ||||| || || ||| | || | || || || |||||| Sbjct 132 CAACCACATGAAAACTTTGTATTCCCTGAGGAGGTATTACCACGTGGAAACGCCCTTTAA 73 Query 164638 TA 164639 || Sbjct 72 TA 71 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 557323489785400