Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= NC_015289.1 Length=176184 Score E Sequences producing significant alignments: (Bits) Value seq19548 129 7e-25 seq20048 82.4 9e-11 >seq19548 Length=251 Score = 129 bits (142), Expect = 7e-25 Identities = 136/179 (76%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 166999 GTGCTTATGACTTTGTTTCCCAAGAACTAAGGGCAGCAGAGGATCCTGAGTTTGAAACCT 167058 |||| || |||||||| || |||||| || | || ||||| ||||| || |||||||| | Sbjct 251 GTGCATACGACTTTGTATCACAAGAATTACGTGCTGCAGAAGATCCAGAATTTGAAACAT 192 Query 167059 TCTATACCAAGAACATTCTCTTGAATGAGGGTATGCGTTCTTGGATGGCAACTATCGATC 167118 ||||||| || || ||| | || || || ||||| ||| | ||||||||| | |||| Sbjct 191 TCTATACAAAAAATATTTTATTAAACGAAGGTATTCGTGCATGGATGGCAGCACAAGATC 132 Query 167119 AACCTCATGAGAGTTTCGTATTCCCTGAAGAGGTTCTTCCTAGAGGTAACGCTCTCTAA 167177 |||| ||||| | || ||||||||||| ||||| | || | || ||||| || ||| Sbjct 131 AACCACATGAAAACTTTGTATTCCCTGAGGAGGTATTACCACGTGGAAACGCCCTTTAA 73 >seq20048 Length=257 Score = 82.4 bits (90), Expect = 9e-11 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 105061 TATTATGATGGATCGGGTGTTGTTCGTGATATGTTACAGAACCATATGCTTCAGGTTCTT 105120 || || |||||||| |||| ||||||||||||||| ||||||||| ||||||| || || Sbjct 233 TACTACGATGGATCTGGTGCTGTTCGTGATATGTTCCAGAACCATTTGCTTCAAGTGCTA 174 Query 105121 GCACTCACTACTATGGAAGCACC 105143 ||| | | || |||||| |||| Sbjct 173 GCAATGGCCACGATGGAATCACC 151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563397450628480