Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08]
37,377 sequences; 493,775,940 total letters
Query= NC_015289.1
Length=176184
Score E
Sequences producing significant alignments: (Bits) Value
seq19548 129 7e-25
seq20048 82.4 9e-11
>seq19548
Length=251
Score = 129 bits (142), Expect = 7e-25
Identities = 136/179 (76%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 166999 GTGCTTATGACTTTGTTTCCCAAGAACTAAGGGCAGCAGAGGATCCTGAGTTTGAAACCT 167058
|||| || |||||||| || |||||| || | || ||||| ||||| || |||||||| |
Sbjct 251 GTGCATACGACTTTGTATCACAAGAATTACGTGCTGCAGAAGATCCAGAATTTGAAACAT 192
Query 167059 TCTATACCAAGAACATTCTCTTGAATGAGGGTATGCGTTCTTGGATGGCAACTATCGATC 167118
||||||| || || ||| | || || || ||||| ||| | ||||||||| | ||||
Sbjct 191 TCTATACAAAAAATATTTTATTAAACGAAGGTATTCGTGCATGGATGGCAGCACAAGATC 132
Query 167119 AACCTCATGAGAGTTTCGTATTCCCTGAAGAGGTTCTTCCTAGAGGTAACGCTCTCTAA 167177
|||| ||||| | || ||||||||||| ||||| | || | || ||||| || |||
Sbjct 131 AACCACATGAAAACTTTGTATTCCCTGAGGAGGTATTACCACGTGGAAACGCCCTTTAA 73
>seq20048
Length=257
Score = 82.4 bits (90), Expect = 9e-11
Identities = 68/83 (82%), Gaps = 0/83 (0%)
Strand=Plus/Minus
Query 105061 TATTATGATGGATCGGGTGTTGTTCGTGATATGTTACAGAACCATATGCTTCAGGTTCTT 105120
|| || |||||||| |||| ||||||||||||||| ||||||||| ||||||| || ||
Sbjct 233 TACTACGATGGATCTGGTGCTGTTCGTGATATGTTCCAGAACCATTTGCTTCAAGTGCTA 174
Query 105121 GCACTCACTACTATGGAAGCACC 105143
||| | | || |||||| ||||
Sbjct 173 GCAATGGCCACGATGGAATCACC 151
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 563397450628480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |