Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08]
37,377 sequences; 493,775,940 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq1473 150 1e-31
>seq1473
Length=2736273
Score = 150 bits (166), Expect = 1e-31
Identities = 170/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| |||| | ||| || || | ||| ||||| || || || || || ||||| |||| |
Sbjct 1453372 CCACCTCGCAGACGCAAGACAAGATGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGAG 1453313
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| || | | |||| |||| ||| || || ||||||||||| | |||||| || || |||
Sbjct 1453312 AGGGTGCGGCCATCTTCCAGTTGTTTGCCAGCAAATATCAACCTCTGTTGGTCAGGAGGA 1453253
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
||||||||||| || || ||||| || ||| | || || |||||| | || ||
Sbjct 1453252 ATGCCTTCTTTGTCCTGGATTTTGGCCTTCACATTCTCAACTGTGTCACTCCCCTCAACC 1453193
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470
||||||||||| || ||||| |||| || |||||||| |||||||||
Sbjct 1453192 TCAAGAGTGACGGTCTTGCCAGTTAGGGTCTTTACAAAGATCTGCATG 1453145
Score = 141 bits (156), Expect = 7e-29
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| |||| | ||| || || | ||| ||||| || || || || || ||||| || | |
Sbjct 1453144 CCACCTCGCAGACGCAAGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 1453085
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| | | | |||| |||| ||| || || ||||||||||| | |||||| || || |||
Sbjct 1453084 AGGGAGCGGCCATCTTCCAGTTGTTTGCCAGCAAATATCAACCTCTGTTGGTCAGGAGGA 1453025
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
||||||||||| || || ||||| || ||| | || || |||||| | || ||
Sbjct 1453024 ATGCCTTCTTTGTCCTGGATTTTGGCCTTCACATTCTCAACTGTGTCACTCCCCTCAACC 1452965
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470
||||||||||| || ||||| |||| || |||||||| |||||||||
Sbjct 1452964 TCAAGAGTGACGGTCTTGCCAGTTAGGGTCTTTACAAAGATCTGCATG 1452917
Score = 141 bits (156), Expect = 7e-29
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| |||| | ||| | || | ||| ||||| ||||| || || || ||||| || | |
Sbjct 1454056 CCACCTCGCAGACGCAGGACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAG 1453997
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| ||| | | |||| |||| ||| || || ||||||||||| | |||||| || || |||
Sbjct 1453996 AGAGTGCGGCCATCTTCCAGTTGTTTGCCAGCAAATATCAACCTCTGTTGGTCAGGAGGA 1453937
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|||||||| || || || ||||| || ||| | || ||||||||| || |||
Sbjct 1453936 ATGCCTTCCTTGTCCTGGATTTTGGCCTTCACATTCTCAACAGTGTCACTTCCCTCAACT 1453877
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470
||||| |||| || ||||| || | ||||| |||||||||||||||
Sbjct 1453876 TCAAGGGTGATGGTCTTGCCAGTAAGGGTTTTCACAAATATCTGCATG 1453829
Score = 136 bits (150), Expect = 3e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| |||| | ||| | || | ||| ||||| || ||||| || || ||||| || | |
Sbjct 1452916 CCACCTCGCAGACGCAGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAG 1452857
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| || | | |||| |||| ||| || || ||||||||||| | ||| || || || |||
Sbjct 1452856 AGGGTGCGGCCATCTTCCAGTTGTTTGCCAGCAAATATCAACCTCTGCTGGTCAGGAGGA 1452797
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
||||||||||| || |||||||| || ||| |||| ||||||||| || ||
Sbjct 1452796 ATGCCTTCTTTGTCCTGAATTTTCACCTTGACATTTTCAACAGTGTCACTGTCCTCAACC 1452737
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470
||||| |||| |||||||| || | || || ||||| |||||||||
Sbjct 1452736 TCAAGGGTGATGGTTTTGCCAGTGAGGGTCTTCACAAAGATCTGCATG 1452689
Score = 136 bits (150), Expect = 3e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| |||| | ||| | || | |||||||||||| |||||||| || ||||| || |
Sbjct 1454284 CCACCTCGCAGACGCAGGACAAGATGAAGGGTAGACTCTTTTTGGATGTTGTAGTCAGAT 1454225
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| || | |||| || ||||||||||| ||||| ||||| | ||| ||||| || |||
Sbjct 1454224 AAGGTGCGTCCATCTTCTAATTGCTTACCAGCAAAGATCAACCTCTGCTGATCAGGGGGA 1454165
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|||||||| || || || ||||| || ||| | || ||||||||| || ||
Sbjct 1454164 ATGCCTTCCTTGTCCTGGATTTTAGCCTTCACATTCTCAACAGTGTCACTGCCCTCGACC 1454105
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470
||||| |||| || ||||| || | || |||||||| |||||||||
Sbjct 1454104 TCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTTACAAAGATCTGCATG 1454057
Score = 136 bits (150), Expect = 3e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| ||||| ||||| | || || ||||| || || || || || |||||||| | |
Sbjct 1454512 CCACCTCTCAAACGCAGGACATGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCAGAG 1454453
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| ||| | |||| |||| | |||| || ||||||||||| | ||| || || || |||
Sbjct 1454452 AGGGTTTGGTCATCTTCCAGTGGCTTGCCGGCAAATATCAACCTCTGCTGGTCTGGGGGA 1454393
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|||||||| || ||||| |||| || ||| | || ||||||||| || || ||
Sbjct 1454392 ATGCCTTCCTTGTCTTGGATTTGGGCCTTGACATTCTCAACAGTGTCACTAGTCTCGACC 1454333
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470
||||| ||||| | |||||||| | || || |||||||||||||||
Sbjct 1454332 TCAAGGGTGACGGGCTTGCCGGTAAGGGTCTTCACAAATATCTGCATG 1454285
Score = 132 bits (146), Expect = 4e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| |||| | ||| || || | ||| ||||| || || || || || ||||| || | |
Sbjct 1453600 CCACCTCGCAGACGCAAGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 1453541
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| || | | |||| || | ||| || || ||||||||||| | |||||| || || |||
Sbjct 1453540 AGGGTGCGGCCATCTTCGAGTTGTTTGCCAGCAAATATCAACCTCTGTTGGTCAGGAGGA 1453481
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
||||||||||| || |||||||| || ||| |||| ||||||||| || ||
Sbjct 1453480 ATGCCTTCTTTGTCCTGAATTTTGACCTTCACATTTTCCACAGTGTCACTGTCCTCAACC 1453421
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470
|| || |||| |||||||| || | || || |||||||| ||||||
Sbjct 1453420 TCTAGGGTGATAGTTTTGCCAGTGAGGGTCTTCACAAATATTTGCATG 1453373
Score = 132 bits (146), Expect = 4e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| |||| | ||| | || | ||| ||||| || || || || || ||||| || | |
Sbjct 1453828 CCACCTCGCAGACGCAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 1453769
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| || | |||| |||| ||| || || ||||||||||| | |||||| || || |||
Sbjct 1453768 AGGGTCCGTCCATCTTCCAGTTGTTTGCCAGCAAATATCAACCTCTGTTGGTCAGGAGGA 1453709
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
||||||||||| || |||||||| || || | || ||||| ||| | || ||
Sbjct 1453708 ATGCCTTCTTTGTCCTGAATTTTGGCCTTCACGTTCTCAACAGTATCACTCCCCTCAACC 1453649
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470
||||||||||| || ||||| |||| || || |||||||| ||||||
Sbjct 1453648 TCAAGAGTGACAGTCTTGCCAGTTAGGGTCTTCACAAATATTTGCATG 1453601
Score = 132 bits (146), Expect = 4e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| |||| | ||| | || | ||| ||||| |||||||| || || |||||||| | |
Sbjct 1455196 CCACCTCGCAGACGCAGGACAAGATGGAGGGTTGATTCTTTCTGGATGTTGTAATCAGAG 1455137
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| || | | |||| || ||||| || || ||||||||||| | ||||||||| || |||
Sbjct 1455136 AGTGTGCGGCCATCTTCTAATTGTTTGCCAGCAAATATCAACCTCTGTTGATCAGGGGGA 1455077
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|| ||||| || || || ||||| ||| ||| | || || |||||| || ||
Sbjct 1455076 ATTCCTTCCTTGTCCTGGATTTTGGCTTTCACATTCTCAACCGTGTCACTGTCCTCAACC 1455017
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470
|||||||||| || || || || | || || ||||| |||||||||
Sbjct 1455016 TCAAGAGTGATGGTCTTACCAGTAAGGGTCTTCACAAAAATCTGCATG 1454969
Score = 131 bits (144), Expect = 1e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| |||| | ||| || || | ||| ||||| || || || || || ||||| || | |
Sbjct 1452688 CCACCTCGCAGACGCAAGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 1452629
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| || | | |||| |||||||| || || || |||||||| | |||||| || || |||
Sbjct 1452628 AGGGTGCGGCCATCTTCCAATTGTTTGCCAGCGAATATCAACCTCTGTTGGTCAGGTGGA 1452569
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|||||||| || | || ||||| || | | | || ||||| ||| | || ||
Sbjct 1452568 ATGCCTTCCTTGTACTGGATTTTGGCCTTCATATTCTCAACAGTATCACTCCCCTCAACC 1452509
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
||||||||||| || ||||| |||| || |||||||| ||||||||
Sbjct 1452508 TCAAGAGTGACAGTCTTGCCAGTTAGGGTCTTTACAAAGATCTGCAT 1452462
Score = 118 bits (130), Expect = 8e-22
Identities = 166/233 (71%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| || || | ||| | || | ||| ||||| || || || || || ||||| || | |
Sbjct 2587728 CCACCCCTGAGACGCAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCTGAG 2587669
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| || | | |||| |||| |||||||| ||||| ||||| | ||| || || || |||
Sbjct 2587668 AGCGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAAATCAACCTCTGCTGGTCTGGGGGA 2587609
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|||||||| || || || ||||| ||| ||| | || | ||||||| | || ||
Sbjct 2587608 ATGCCTTCCTTGTCCTGGATTTTGGCTTTGACATTCTCAATAGTGTCACTGGGCTCAACC 2587549
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGTTAC 101475
|| || |||| || ||||| || | || || ||||| ||||||||| ||||
Sbjct 2587548 TCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCATGTTTAC 2587496
Score = 114 bits (126), Expect = 1e-20
Identities = 165/233 (71%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| || || | ||| | || | ||| ||||| || || || || || ||||| || | |
Sbjct 2590175 CCACCCCTGAGACGCAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 2590234
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| ||| | | || |||| |||||||| ||||| ||||| | ||| || || || |||
Sbjct 2590235 AGAGTGCGACCGTCTTCCAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCAGGTGGA 2590294
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|||||||| || || || ||||| ||| ||| | || | ||||||| | || ||
Sbjct 2590295 ATGCCTTCCTTGTCCTGGATTTTGGCTTTGACATTCTCAATAGTGTCACTGGGCTCAACC 2590354
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGTTAC 101475
|| || |||| || ||||| || | || || ||||| ||||||||| ||||
Sbjct 2590355 TCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCATGTTTAC 2590407
Score = 109 bits (120), Expect = 4e-19
Identities = 147/205 (72%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325
||| ||||| || || ||||| || ||||| || | | || | | |||| || | |||
Sbjct 2588161 ATGGAGGGTGGACTCCTTTTGGATGTTGTAGTCTGACAGTGTGCGGCCATCTTCTAGTTG 2588102
Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385
||| || ||||| ||||| | ||| || || || ||||||||||| || || || |||||
Sbjct 2588101 CTTGCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATTTT 2588042
Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445
||| ||| | || | |||||| | ||| || ||||| |||| || ||||| ||
Sbjct 2588041 GGCTTTGACATTCTCAATGGTGTCACTGGGTTCAACCTCAAGGGTGATTGTCTTGCCAGT 2587982
Query 101446 TAAAGTTTTTACAAATATCTGCATG 101470
| || || || || |||||||||
Sbjct 2587981 GAGCGTCTTCACGAAGATCTGCATG 2587957
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| || || | ||| | || | ||| || || || || || || || ||||| || |
Sbjct 2587956 CCACCCCTGAGACGCAGGACAAGATGGAGAGTTGACTCCTTCTGGATGTTGTAGTCTGAT 2587897
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| || | | |||| || | |||||| || ||||| ||||| | ||| || || || |||
Sbjct 2587896 AGTGTACGGCCATCTTCTAGTTGCTTGCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGA 2587837
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|||||||| || || || ||||| ||| ||| | || | |||||| | ||| ||
Sbjct 2587836 ATGCCTTCCTTGTCCTGGATTTTGGCTTTGACATTCTCGATGGTGTCACTGGGTTCAACC 2587777
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470
||||| || | || ||||| || | || || || || |||||||||
Sbjct 2587776 TCAAGGGTTATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCATG 2587729
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396097882433589
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