Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= NC_019444.1 Length=176043 Score E Sequences producing significant alignments: (Bits) Value seq19548 129 7e-25 >seq19548 Length=251 Score = 129 bits (142), Expect = 7e-25 Identities = 118/149 (79%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 165477 GCAGCAGAAGATCCAGAATTTGAGACCTTCTACACCAAAAACATCCTATTGAATGAAGGA 165536 || |||||||||||||||||||| || ||||| || ||||| || |||| || ||||| Sbjct 219 GCTGCAGAAGATCCAGAATTTGAAACATTCTATACAAAAAATATTTTATTAAACGAAGGT 160 Query 165537 CTACGTGCTTGGTTGGCACCTGCTGATCAACCCCATGAAAACTTTATCTTCCCAGAAGAA 165596 | ||||| ||| ||||| | |||||||| |||||||||||| | ||||| || || Sbjct 159 ATTCGTGCATGGATGGCAGCACAAGATCAACCACATGAAAACTTTGTATTCCCTGAGGAG 100 Query 165597 GTATTGCCTAGAGGCAACGCCCTTTAATA 165625 ||||| || | || |||||||||||||| Sbjct 99 GTATTACCACGTGGAAACGCCCTTTAATA 71 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562946461434760