Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= NC_019544.1 Length=49335 Score E Sequences producing significant alignments: (Bits) Value seq5974 87.8 6e-13 >seq5974 Length=209 Score = 87.8 bits (96), Expect = 6e-13 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 45620 TTTTTAAAAGGCGATACGAATGTTCGCTATTTGCAGGAGAATGGTGTGACGATTTGGGAC 45679 |||||||| || ||||||||||| |||||||| || ||||| || |||||| | Sbjct 209 TTTTTAAATGGGGATACGAATGTGAAATATTTGCAAGAAAATGGCGTTCGAATTTGGAAT 150 Query 45680 GAGTGGGCCGATGAAAACGGCGATCTCGGCCCAATCTACGGCGCGCAATGGCGGTCGTGG 45739 || ||||| |||||||| || ||| | || || | || ||| |||||||| ||| Sbjct 149 GAATGGGCAGATGAAAATGGAGATTTGGGACCTGTTTATGGCAAACAATGGCGAAGTTGG 90 Query 45740 AAAGGGGCTGACGGGAAAACGGTCGACCAAATT 45772 || || ||||| |||||| ||||||||| Sbjct 89 TTGGGAGCGGACGGAAAAACGACTGACCAAATT 57 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157680382189178