Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08]
37,377 sequences; 493,775,940 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq1473 96.9 5e-15
>seq1473
Length=2736273
Score = 96.9 bits (106), Expect = 5e-15
Identities = 115/156 (74%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||||||| | || || | ||||| |||||||| || |||| || || || |
Sbjct 1453374 ATGCAAATATTTGTGAAGACCCTCACTGGCAAAACTATCACCCTAGAGGTTGAGGACAGT 1453433
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | | | ||| ||||| ||||| || || ||||||||||| ||||| || |||
Sbjct 1453434 GACACTGTGGAAAATGTGAAGGTCAAAATTCAGGACAAAGAAGGCATTCCTCCTGACCAA 1453493
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978
|| || ||||| | ||| || || || |||||||||
Sbjct 1453494 CAGAGGTTGATATTTGCTGGCAAACAACTCGAAGAT 1453529
Score = 84.2 bits (92), Expect = 3e-11
Identities = 112/156 (72%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||||||| | || || | ||||| || ||| | || | || || || | |
Sbjct 1453602 ATGCAAATATTTGTGAAGACCCTAACTGGCAAGACTGTCACTCTTGAGGTTGAGGGGAGT 1453661
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| | || |||||||| ||||| || || ||||||||||| ||||| || |||
Sbjct 1453662 GATACTGTTGAGAACGTGAAGGCCAAAATTCAGGACAAAGAAGGCATTCCTCCTGACCAA 1453721
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978
|| || ||||| | ||| || || || || ||||||
Sbjct 1453722 CAGAGGTTGATATTTGCTGGCAAACAACTGGAAGAT 1453757
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731530060253200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |