Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= NC_021804.1 Length=28760 Score E Sequences producing significant alignments: (Bits) Value seq18954 120 6e-23 >seq18954 Length=246 Score = 120 bits (132), Expect = 6e-23 Identities = 143/194 (74%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 26475 ATATCAAGAAGGTTAAAAATGTTAGCTAAAGAACTGCAGGTGCCTATAATTGCTTTATGT 26534 || ||||||| |||||| ||||| |||||| | | || ||| | ||||| |||| Sbjct 234 ATTTCAAGAAATTTAAAAGCATTAGCAAAAGAATTAAATGTTCCTGTTATTGCCTTATCG 175 Query 26535 CAATTATCTAGGGCTGTAGAAACTCGTGGTGGTTCTAAACGTCCTTTGTTATCAGATTTG 26594 |||||||| | || |||||||| | || || ||| || || | ||||||| || Sbjct 174 CAATTATCACGTGCAGTAGAAACCAGAGGAGGAAGTAAGCGCCCAATACTATCAGACTTA 115 Query 26595 CGTGAATCAGGTGCAATAGAGCAGGATGCAGATATAGTAGAGTTTATTTATAGACCAGAT 26654 | ||||| || ||||| || || ||||||||||| ||| |||||| || | ||||| Sbjct 114 AGAGAATCTGGAGCAATTGAACAAGATGCAGATATTGTATCGTTTATATACCGCCCAGAA 55 Query 26655 TATTATAAAATAGA 26668 |||||||||||||| Sbjct 54 TATTATAAAATAGA 41 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 91869605396628