Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= NC_022053.1 Length=70657 Score E Sequences producing significant alignments: (Bits) Value seq10892 95.1 5e-15 >seq10892 Length=223 Score = 95.1 bits (104), Expect = 5e-15 Identities = 156/223 (70%), Gaps = 4/223 (2%) Strand=Plus/Minus Query 2719 GCTGACCCAGGCAGCACCAAAATCCTAGAGAAGAAACTGAATGTGCGTGCTCGGGGTGGC 2778 ||||| ||||| || || ||| | |||||||| || ||||| | |||| |||||| Sbjct 221 GCTGATCCAGGGGCAACTAAGATCATGGAGAAGAAGCTCAATGTCAGGTCTCGTGGTGGC 162 Query 2779 ACCGGCGGAGAGTTGCGCAACCGGCTCAACTGGATTCGCAAATTCCTTAGGGAGCCTAGG 2838 || || || ||| | |||||| |||| |||||||| || | || || ||||| || Sbjct 161 ACAGGTGGGGAGCTCAACAACCGAATCAATTGGATTCGTAAGCTTCTCAGAGAGCCACGG 102 Query 2839 GTTGTCGTGGATGAACCGTACGTGGAAGTTAGCC--TCGACGGCCTCACGGTGGGCCAGT 2896 | || ||||| || ||| || || | | |||||| || ||| || || Sbjct 101 TATACAGTCGATGACCCATACCACGAC--TACTCAATGGACGGCATCGAGGTAGGACAAG 44 Query 2897 ACCGGCCACGGCTGATGTTTGACCGAAAGTGTAAGAAGACTAT 2939 || |||||| || |||||||||||||||||||| | ||||| Sbjct 43 CTCGACCACGGTTGCTGTTTGACCGAAAGTGTAAGCACACTAT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 225874659929546