Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08]
37,377 sequences; 493,775,940 total letters
Query= NC_022090.1
Length=134643
Score E
Sequences producing significant alignments: (Bits) Value
seq8470 100 2e-16
seq23546 86.0 5e-12
>seq8470
Length=217
Score = 100 bits (110), Expect = 2e-16
Identities = 97/125 (78%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 66489 GAAATTATGTTACCTAATAAAGAAGATTGGTCATTTGTATGTGACCTATCTAGTATGAAC 66548
|||||||||||||| || || || ||||| ||||| |||| |||||| || || ||
Sbjct 93 GAAATTATGTTACCATCCAATGACGAATGGTCGTTTGTCTGTGTCCTATCAAGCATAAAT 152
Query 66549 CTTGTTAAGTATGATGAATGGAAACACACGGATGCTGTAGAGACACTTGTTTACTTTTTA 66608
||| | || ||||| |||||||| |||| ||||||||||| || | || || || |||
Sbjct 153 CTTTTGAACTATGACAAATGGAAAGACACCGATGCTGTAGAAACTATGGTGTATTTCTTA 212
Query 66609 GATGC 66613
|||||
Sbjct 213 GATGC 217
>seq23546
Length=320
Score = 86.0 bits (94), Expect = 5e-12
Identities = 151/218 (69%), Gaps = 4/218 (2%)
Strand=Plus/Minus
Query 63578 TTGATTGGATGTATGAAGATGGGGAACTAGAGTTCTTACCTAAGAAAGTAGTACAAGAAT 63637
|||||||||| | |||||| || ||| |||| ||||||||||| || ||| | ||||
Sbjct 305 TTGATTGGATTTTTGAAGAAGGAGAATTAGATTTCTTACCTAAATCTGTTGTAAATGAAT 246
Query 63638 TTATTAAAAATAGGCTTAATAACTCTCTAGTAGCTGTTGGGTATACTAAACTTTTTGATG 63697
|||||||||| | |||| |||||| ||| | | || | | ||| | ||||||
Sbjct 245 TTATTAAAAAGCGTTTTAACAACTCTTTAGAGAGTATCGGAATTGCCAAAATATTTGATA 186
Query 63698 TTGATGAAGAGTTACTAAGTGAAGTGTCATGGTTTGATGATGAAGTTATTAGTACTAAGT 63757
|||| || | || || || |||||||||||||||| |||| | || ||
Sbjct 185 TTGACCAAAAACTATTAGCACAAACCGAATGGTTTGATGATGAAATTATAGGAACAAA-- 128
Query 63758 TAACG--GACTTTTTATCTAAACGTTCTGTAAACTATA 63793
||| |||||||| ||||| ||| | || ||||
Sbjct 127 ACACGGCGACTTTTTTGTAAAACGCTCTATTAATTATA 90
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430536587345388
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |