Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08]
37,377 sequences; 493,775,940 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq809 113 3e-19
>seq809
Length=886213
Score = 113 bits (124), Expect = 3e-19
Identities = 114/147 (78%), Gaps = 1/147 (1%)
Strand=Plus/Plus
Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391
||||| || | ||||| || | |||||| |||||||||||||| || || | || ||||
Sbjct 477108 TTTTTGTCCAAGCCATATGCGATAGCAGCTGCAGTTGGTTCATTGATGATACGCAGAACA 477167
Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451
|| || |||| ||| ||||||||||||| || || || | ||| ||||| || || ||
Sbjct 477168 TTGAGCCCAGAGATTGTTCCTGCATCTTTTGTAGCCTGGCGTTGGGAATCATTGAAGTAG 477227
Query 282452 GCAGGAACAGTAATAACGGCATCTGTT 282478
|| || || |||||||| |||| ||||
Sbjct 477228 GCGGGCACCGTAATAACAGCAT-TGTT 477253
Score = 100 bits (110), Expect = 2e-15
Identities = 136/190 (72%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 282690 CAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 282749
|||| | || ||||| || || | |||| | |||| ||||||||||| || |||||
Sbjct 478781 CAAAGACTGTGTTGGTGGGGTTCATTGCAACCTGATTCTTGGCTGCATCACCTATCAGCC 478840
Query 282750 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 282809
|| || ||||| || | ||||| || || || | || ||||| ||||| ||||
Sbjct 478841 TCTCGGTGTCTGTGAAGGCCACATAACTAGGTGTGGTCCTGTTTCCTTGGTCATTTGCAA 478900
Query 282810 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 282869
| ||||||||||| |||| || ||||||| ||||| | || || || | |||||
Sbjct 478901 TGATTTCAACTTTTCCATGCTGGAATACACCAACACAGGAGTAGGTGGTCCCCAGATCAA 478960
Query 282870 TACCAATAGC 282879
|||||| |||
Sbjct 478961 TACCAACAGC 478970
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3738795347255202
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |