Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08]
37,377 sequences; 493,775,940 total letters
Query= NC_023719.1
Length=497513
Score E
Sequences producing significant alignments: (Bits) Value
seq22746 165 3e-35
seq23299 87.8 6e-12
>seq22746
Length=301
Score = 165 bits (182), Expect = 3e-35
Identities = 211/291 (73%), Gaps = 0/291 (0%)
Strand=Plus/Minus
Query 188792 CAGGTAAAACATTATTTGCTCAAACATTGGCTGATATGTTACATGTACCTCTAGCTATCT 188851
||||||| || ||| | || |||| | || | ||| || |||| || |||| ||
Sbjct 299 CAGGTAAGACTTTAATAGCAAAAACCATTGCAAAAATGCTAAATGTGCCATTAGCAATTG 240
Query 188852 CTGATGCAACTTCTTTAACAGAAGCTGGTTATGTAGGTGAAGATGTGGAAAACGTATTGC 188911
||||| ||| | |||||||||||||| |||||||||||||| |||| | ||
Sbjct 239 TAGATGCTACTGTGCTTACAGAAGCTGGTTACGTAGGTGAAGATGTAGAAAGTATTTTAA 180
Query 188912 TTCGTTTAATCCAAGCAGCTGATTACGATATCGAATTAGCGGAACGTGGAATTGTATATA 188971
||||||| | |||||||| || ||| || | ||| ||| ||||| || ||||| | |
Sbjct 179 CTCGTTTATTACAAGCAGCGGACTACAATCTAGAAAAAGCAGAACGAGGTATTGTTTTCA 120
Query 188972 TCGATGAAGTAGATAAAATTGCTAGAAAATCAGAAAGCACATCCATTACCCGAGATGTAT 189031
| |||||| ||||||||||||| | ||| || | |||||||||| |||||||| |
Sbjct 119 TAGATGAAATAGATAAAATTGCCCGCAAAAGCGATAATCCATCCATTACACGAGATGTTT 60
Query 189032 CTGGCGAAGGAGTACAGCAAGCTTTATTAAAAATCATTGAAGGTACAGTTG 189082
|||| ||||| ||||| |||| | |||||| | | || || || ||||
Sbjct 59 CTGGAGAAGGCGTACAACAAGGCCTTTTAAAACTTTTAGAGGGCACTGTTG 9
>seq23299
Length=314
Score = 87.8 bits (96), Expect = 6e-12
Identities = 66/78 (85%), Gaps = 0/78 (0%)
Strand=Plus/Plus
Query 411232 ATGGTGGTTGTAGCTCAATTGGTTAGAGCGCTAGATTGTGGATCTAGAGGTTGTGGGTTC 411291
||||||||||||||||| ||||||||||||| |||||||| || |||||| | |||||
Sbjct 172 ATGGTGGTTGTAGCTCAGCTGGTTAGAGCGCTTGATTGTGGTTCAAGAGGTCGCCGGTTC 231
Query 411292 GATCCCCATCATCCACCC 411309
|| ||| || |||||||
Sbjct 232 GAACCCGGTCTTCCACCC 249
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1591148045551296
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |