Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq1476 107 3e-18 >seq1476 Length=595132 Score = 107 bits (118), Expect = 3e-18 Identities = 121/162 (75%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 58379 GCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCATA 58438 ||||| |||||||| | || || ||||| || |||||| | || || ||||||||||| Sbjct 446646 GCATTGTGGTGGTATTTCATCTCCAAAGGCATCGAATACCTGGACACGGTGTTTTTCATC 446587 Query 58439 CTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGTTT 58498 || ||||||||||| | || || | |||||| ||||| || || || | || ||||| Sbjct 446586 CTGAGGAAAAAGTTCAGCCAGGTCACCTTTCTGCACGTTTACCACCACTGCACCATGTTC 446527 Query 58499 ACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCAG 58540 || | | ||| | || || |||||| | |||||||| ||| Sbjct 446526 ACGCTCTGGTGGATCGGCATCAAATGGGTGGCAGGAGGACAG 446485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 902989114994720