Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= NC_024450.1 Length=204054 Score E Sequences producing significant alignments: (Bits) Value seq1140 105 9e-18 seq1387 95.1 2e-14 seq1551 91.5 2e-13 seq1197 91.5 2e-13 seq812 91.5 2e-13 seq940 89.7 7e-13 seq898 89.7 7e-13 seq354 89.7 7e-13 seq1385 87.8 2e-12 seq1364 87.8 2e-12 seq1179 86.0 8e-12 seq457 82.4 1e-10 >seq1140 Length=412969 Score = 105 bits (116), Expect = 9e-18 Identities = 69/76 (91%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 8654 TTATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCG 8713 ||| ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||| Sbjct 229483 TTACTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCG 229542 Query 8714 ATTCCCCGACGAGGAG 8729 ||||||||||| |||| Sbjct 229543 ATTCCCCGACGGGGAG 229558 Score = 100 bits (110), Expect = 4e-16 Identities = 66/72 (92%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 229487 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 229546 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 229547 CCCGACGGGGAG 229558 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 229558 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 229499 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 229498 TACTAACGAGGA 229487 >seq1387 Length=6006640 Score = 95.1 bits (104), Expect = 2e-14 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 8653 CTTATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTC 8712 || |||||||||||||||||||| ||||| ||| ||||| | ||| |||||||||||| Sbjct 5611612 CTCATTCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTC 5611553 Query 8713 GATTCCCCGACGAGGAG 8729 |||||||||||| |||| Sbjct 5611552 GATTCCCCGACGGGGAG 5611536 Score = 93.3 bits (102), Expect = 6e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 8656 ATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 8715 |||||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||| Sbjct 5611979 ATTCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGAT 5611920 Query 8716 TCCCCGACGAGGAG 8729 ||||||||| |||| Sbjct 5611919 TCCCCGACGGGGAG 5611906 Score = 91.5 bits (100), Expect = 2e-13 Identities = 72/84 (86%), Gaps = 2/84 (2%) Strand=Plus/Minus Query 11718 TGTGTAACCCAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACC 11776 |||||| | || |||||||||||||||||| ||||| ||| ||||| | ||| ||||| Sbjct 5611618 TGTGTA-CTCATTCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACC 5611560 Query 11777 GGGGTTCGATTCCCCGACGAGGAG 11800 ||||||||||||||||||| |||| Sbjct 5611559 GGGGTTCGATTCCCCGACGGGGAG 5611536 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 ||||||||||||||||||| ||||| ||| ||||| | ||| |||||||||||||||| Sbjct 5612306 TTCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATT 5612247 Query 8717 CCCCGACGAGGAG 8729 |||||||| |||| Sbjct 5612246 CCCCGACGGGGAG 5612234 Score = 89.7 bits (98), Expect = 7e-13 Identities = 71/83 (86%), Gaps = 2/83 (2%) Strand=Plus/Minus Query 11719 GTGTAACCCAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCG 11777 ||||| | || |||||||||||||||||| ||||| ||| ||||| | ||| |||||| Sbjct 5611987 GTGTA-CGCATTCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCG 5611929 Query 11778 GGGTTCGATTCCCCGACGAGGAG 11800 |||||||||||||||||| |||| Sbjct 5611928 GGGTTCGATTCCCCGACGGGGAG 5611906 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 139349 ACAACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACC 139408 |||||||| ||||||||| |||||||||||||| ||| | |||| ||| |||| | || Sbjct 5611902 ACAACTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCC 5611961 Query 139409 ACTATACTAACGAGGA 139424 |||||||||||||||| Sbjct 5611962 ACTATACTAACGAGGA 5611977 Score = 86.0 bits (94), Expect = 8e-12 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 5612305 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 5612246 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 5612245 CCCGACGGGGAG 5612234 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 139351 AACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCAC 139410 |||||| ||||||||| |||||||||||||| ||| | |||| ||| |||| | |||| Sbjct 5611534 AACTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCAC 5611593 Query 139411 TATACTAACGAGGA 139424 |||||||||||||| Sbjct 5611594 TATACTAACGAGGA 5611607 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 139351 AACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCAC 139410 |||||| ||||||||| |||||||||||||| ||| | |||| ||| |||| | |||| Sbjct 5612232 AACTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCAC 5612291 Query 139411 TATACTAACGAGGA 139424 |||||||||||||| Sbjct 5612292 TATACTAACGAGGA 5612305 >seq1551 Length=3044278 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 ||||||||||||||||||| ||||| ||| ||||| | ||| |||||||||||||||| Sbjct 1353528 TTCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATT 1353587 Query 8717 CCCCGACGAGGAG 8729 |||||||| |||| Sbjct 1353588 CCCCGACGGGGAG 1353600 Score = 86.0 bits (94), Expect = 8e-12 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 1353529 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 1353588 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 1353589 CCCGACGGGGAG 1353600 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 139351 AACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCAC 139410 |||||| ||||||||| |||||||||||||| ||| | |||| ||| |||| | |||| Sbjct 1353602 AACTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCAC 1353543 Query 139411 TATACTAACGAGGA 139424 |||||||||||||| Sbjct 1353542 TATACTAACGAGGA 1353529 >seq1197 Length=5832386 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 ||||||||||||||||||| ||||| ||| ||||| | ||| |||||||||||||||| Sbjct 70111 TTCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATT 70170 Query 8717 CCCCGACGAGGAG 8729 |||||||| |||| Sbjct 70171 CCCCGACGGGGAG 70183 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 67069 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 67128 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 67129 CCCGACGGGGAG 67140 Score = 89.7 bits (98), Expect = 7e-13 Identities = 68/78 (87%), Gaps = 2/78 (3%) Strand=Plus/Plus Query 11726 CCAGT-CCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTC 11783 ||||| ||||||||||||||||| ||||| ||| ||||| | ||| |||||||||||| Sbjct 70107 CCAGTTCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTC 70166 Query 11784 GATTCCCCGACGAGGAGG 11801 |||||||||||| ||||| Sbjct 70167 GATTCCCCGACGGGGAGG 70184 Score = 86.0 bits (94), Expect = 8e-12 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 67069 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 67128 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 67129 CCCGACGGGGAG 67140 >seq812 Length=3846642 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 ||||||||||||||||||| ||||| ||| ||||| | ||| |||||||||||||||| Sbjct 1011190 TTCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATT 1011131 Query 8717 CCCCGACGAGGAG 8729 |||||||| |||| Sbjct 1011130 CCCCGACGGGGAG 1011118 Score = 89.7 bits (98), Expect = 7e-13 Identities = 66/76 (87%), Gaps = 1/76 (1%) Strand=Plus/Minus Query 11727 CAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785 || |||||||||||||||||| ||||| ||| ||||| | ||| |||||||||||||| Sbjct 1010544 CACTCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGA 1010485 Query 11786 TTCCCCGACGAGGAGG 11801 |||||||||| ||||| Sbjct 1010484 TTCCCCGACGGGGAGG 1010469 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 1010541 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 1010482 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 1010481 CCCGACGGGGAG 1010470 Score = 87.8 bits (96), Expect = 2e-12 Identities = 64/73 (88%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 1011189 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 1011130 Query 11789 CCCGACGAGGAGG 11801 ||||||| ||||| Sbjct 1011129 CCCGACGGGGAGG 1011117 >seq940 Length=7378152 Score = 89.7 bits (98), Expect = 7e-13 Identities = 66/76 (87%), Gaps = 1/76 (1%) Strand=Plus/Plus Query 11727 CAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785 || |||||||||||||||||| ||||| ||| ||||| | ||| |||||||||||||| Sbjct 4888871 CACTCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGA 4888930 Query 11786 TTCCCCGACGAGGAGG 11801 |||||||||| ||||| Sbjct 4888931 TTCCCCGACGGGGAGG 4888946 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 4888874 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 4888933 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 4888934 CCCGACGGGGAG 4888945 >seq898 Length=3112739 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 2920252 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 2920193 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 2920192 CCCGACGGGGAG 2920181 Score = 86.0 bits (94), Expect = 8e-12 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 2920252 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 2920193 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 2920192 CCCGACGGGGAG 2920181 Score = 84.2 bits (92), Expect = 3e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||| ||| | |||| ||| |||| | |||||| Sbjct 2920181 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACTA 2920240 Query 139413 TACTAACGAGGATTTT 139428 ||||||||||||| || Sbjct 2920241 TACTAACGAGGATGTT 2920256 >seq354 Length=3526367 Score = 89.7 bits (98), Expect = 7e-13 Identities = 70/82 (85%), Gaps = 5/82 (6%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 2718169 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 2718228 Query 11789 CCCGACGAGGAGGGAGGTTAAC 11810 ||||||| ||||||||||| Sbjct 2718229 CCCGACG----GGGAGGTTAAC 2718246 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 2718169 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 2718228 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 2718229 CCCGACGGGGAG 2718240 >seq1385 Length=417247 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 ||||| ||||||||||||| ||||| ||||||||| | ||| |||||||||||||||| Sbjct 416484 TTCCTTGTTAGTATAGTGGGCAGTATCTCCGTCTGTCACGCGGAAGACCGGGGTTCGATT 416425 Query 8717 CCCCGACGAGGAG 8729 ||| ||| ||||| Sbjct 416424 CCCTGACAAGGAG 416412 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/80 (85%), Gaps = 1/80 (1%) Strand=Plus/Minus Query 8651 GCCT-TATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGG 8709 |||| ||||||| ||||||| |||||| ||||| ||||||||| | || ||||||||| Sbjct 416789 GCCTGTATTCCTTGTTAGTACAGTGGTCAGTATCTCCGTCTGTCACGTGGAAGACCGGGG 416730 Query 8710 TTCGATTCCCCGACGAGGAG 8729 |||||||||| ||| ||||| Sbjct 416729 TTCGATTCCCTGACAAGGAG 416710 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 ||||||||||||||||||| ||||| ||| ||||| | ||| |||||||||||||||| Sbjct 417083 TTCCTCGTTAGTATAGTGGCCAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATT 417024 Query 8717 CCCCGACGAGGAG 8729 ||| |||| |||| Sbjct 417023 CCCTGACGGGGAG 417011 Score = 84.2 bits (92), Expect = 3e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 139349 ACAACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACC 139408 ||||||||| ||| |||| |||||||||||||| ||| | |||| |||| |||| | || Sbjct 416408 ACAACTCCTTGTCAGGGAATCGAACCCCGGTCTTCCGCGTGACAGACGGAGATACTGCCC 416467 Query 139409 ACTATACTAACGAGGA 139424 ||||||||||| |||| Sbjct 416468 ACTATACTAACAAGGA 416483 Score = 84.2 bits (92), Expect = 3e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 139349 ACAACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACC 139408 |||||||| |||| |||| |||||||||||||| ||| | |||| ||| |||| | || Sbjct 417007 ACAACTCCCCGTCAGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGGCC 417066 Query 139409 ACTATACTAACGAGGA 139424 |||||||||||||||| Sbjct 417067 ACTATACTAACGAGGA 417082 Score = 82.4 bits (90), Expect = 1e-10 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 ||||||||||||||||| | ||||| ||||||||| ||||| |||| ||||||||||| Sbjct 405072 TTCCTCGTTAGTATAGTTGACAGTATCTCCGTCTGTCACACGGAAGACAGGGGTTCGATT 405013 Query 8717 CCCCGACGAGGAG 8729 || |||| |||| Sbjct 405012 TCCTGACGGGGAG 405000 Score = 82.4 bits (90), Expect = 1e-10 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 ||||||||||||||||||| ||||| ||| ||||| | ||| |||| ||||||||||| Sbjct 416186 TTCCTCGTTAGTATAGTGGAGAGTATCTCCGCCTGTCACGCGGAAGACTGGGGTTCGATT 416127 Query 8717 CCCCGACGAGGAG 8729 ||| |||| |||| Sbjct 416126 CCCTGACGGGGAG 416114 Score = 82.4 bits (90), Expect = 1e-10 Identities = 62/72 (86%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||| ||||||||||||| ||||| ||||||||| | ||| ||||||||||||||||| Sbjct 416483 TCCTTGTTAGTATAGTGGGCAGTATCTCCGTCTGTCACGCGGAAGACCGGGGTTCGATTC 416424 Query 11789 CCCGACGAGGAG 11800 || ||| ||||| Sbjct 416423 CCTGACAAGGAG 416412 Score = 82.4 bits (90), Expect = 1e-10 Identities = 62/72 (86%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 417082 TCCTCGTTAGTATAGTGGCCAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 417023 Query 11789 CCCGACGAGGAG 11800 || |||| |||| Sbjct 417022 CCTGACGGGGAG 417011 >seq1364 Length=721126 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 ||||||||||||||||||| ||||| ||| ||||| | ||| |||||||||||||||| Sbjct 462964 TTCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATT 462905 Query 8717 CCCCGACGAGGAG 8729 ||| |||| |||| Sbjct 462904 CCCTGACGGGGAG 462892 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 ||||||||||||||||||| ||||| ||| ||||| | ||| ||||| |||||||||| Sbjct 456724 TTCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCAGGGTTCGATT 456665 Query 8717 CCCCGACGAGGAGC 8730 ||| |||| ||||| Sbjct 456664 CCCTGACGGGGAGC 456651 Score = 82.4 bits (90), Expect = 1e-10 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 ||||||||||||||||||| ||||| ||| ||||| | ||| |||||||| ||||||| Sbjct 451637 TTCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGTTTCGATT 451578 Query 8717 CCCCGACGAGGAG 8729 ||| |||| |||| Sbjct 451577 CCCTGACGGGGAG 451565 Score = 82.4 bits (90), Expect = 1e-10 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 139350 CAACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCA 139409 ||||||| |||| |||| |||||||||||||| ||| | |||| ||| |||| | ||| Sbjct 462889 CAACTCCCCGTCAGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCA 462948 Query 139410 CTATACTAACGAGGA 139424 ||||||||||||||| Sbjct 462949 CTATACTAACGAGGA 462963 Score = 82.4 bits (90), Expect = 1e-10 Identities = 62/72 (86%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 462963 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 462904 Query 11789 CCCGACGAGGAG 11800 || |||| |||| Sbjct 462903 CCTGACGGGGAG 462892 >seq1179 Length=335685 Score = 86.0 bits (94), Expect = 8e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 ||||||||||||||||||| ||||| ||| ||||| | ||| | |||||||||||||| Sbjct 331848 TTCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAAACCGGGGTTCGATT 331907 Query 8717 CCCCGACGAGGA 8728 ||| |||||||| Sbjct 331908 CCCTGACGAGGA 331919 Score = 82.4 bits (90), Expect = 1e-10 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 |||| |||||||||||||| ||||| ||| ||||| | ||| |||||||||||||||| Sbjct 332766 TTCCCCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATT 332825 Query 8717 CCCCGACGAGGAG 8729 |||||| | |||| Sbjct 332826 CCCCGATGGGGAG 332838 >seq457 Length=54161 Score = 82.4 bits (90), Expect = 1e-10 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 ||||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||| |||| Sbjct 27512 TTCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTTGATT 27453 Query 8717 CCCCGACGAGGAG 8729 ||| |||| |||| Sbjct 27452 CCCTGACGGGGAG 27440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 652539782748880