Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08]
37,377 sequences; 493,775,940 total letters
Query= NC_024696.1
Length=180800
Score E
Sequences producing significant alignments: (Bits) Value
seq847 96.9 4e-15
>seq847
Length=1458800
Score = 96.9 bits (106), Expect = 4e-15
Identities = 198/289 (69%), Gaps = 4/289 (1%)
Strand=Plus/Plus
Query 162640 CGCACCATCTCTAGATTGGTCTTAAGGGGAAAGTCGGTGCCGCAGAGATTAATAACATAT 162699
||||||||||| || |||||||||||||||||||| ||| ||||| ||||| | ||
Sbjct 1108425 CGCACCATCTCCAGGTTGGTCTTAAGGGGAAAGTCCTGGCCACAGAGGTTAATGAAGTAC 1108484
Query 162700 TTCCACTTAACG-CTGAGTCCGTACAGATCCTGTAGACAGTTCAGATCGGCCTGGACGCG 162758
|||||| ||| ||| | || ||| || | ||||| || ||||||||||| ||
Sbjct 1108485 TTCCACGCCACGCCTGTG-CCCAGCAGCTCGGACATGCAGTTAAGGTCGGCCTGGACCCG 1108543
Query 162759 ACTCCACGACGCGTACACGACGCTCTCCAACCTAGTGGCGACAAAGACATTGTCGAAACA 162818
||| ||||| || |||||||| || |||| | || |||||| ||| ||
Sbjct 1108544 GGACCAGCCGGCGTAGACCACGCTCTCTCGCCGGCTGGCCAGGAACACATTGGGGAAGCA 1108603
Query 162819 CGAAACTATCCCCATCACGGCCAGTGAGAAC-ATCGGGTCCGCTTTCCTATCTACGTGTA 162877
|| | | || || | ||| || || ||| ||| ||| || || || |
Sbjct 1108604 GGAGGCCACGGCCGAGACTG-CAGCCAGCACTGACGGCGACGCCTTCAGGTCCACATGGA 1108662
Query 162878 CGCAGTATAGATTCTGAGGGGCGTAGATGGCCCTCAGTAATCTCTCGAA 162926
|||||| | |||||||| ||||||||||||| || | | ||||||
Sbjct 1108663 TGCAGTAGATGTTCTGAGGAGCGTAGATGGCCCGGAGGAGACGCTCGAA 1108711
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578161749339200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |