Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq10769 84.2 5e-11 >seq10769 Length=223 Score = 84.2 bits (92), Expect = 5e-11 Identities = 119/168 (71%), Gaps = 6/168 (4%) Strand=Plus/Plus Query 131783 AAATTTCCTGCAATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCC 131842 || ||||| || || || ||||| ||||| ||||| | || ||||| || || Sbjct 30 AATTTTCCGGCTATCAAGAAGAAGGCAGATTGGGCCTTAAAGTGGATAGAA------TCA 83 Query 131843 GCTAATTTTTCTACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGT 131902 | | |||| || | | || | |||||||| ||| || || || ||||||||||| Sbjct 84 CCAAGTTTTGCTGAACGCCTGATTGCTTTTGCAGCTGTGGAGGGCATTTTCTTTTCAGGG 143 Query 131903 GCTTTCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGA 131950 || || ||| |||| || ||| | || || |||||||||||||| ||| Sbjct 144 GCCTTTTGTTCTATTTTCTGGTTGAAAAAACGTGGATTGATGCCCGGA 191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186244443880297