Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq696 228 9e-55 >seq696 Length=192186 Score = 228 bits (252), Expect = 9e-55 Identities = 200/249 (80%), Gaps = 0/249 (0%) Strand=Plus/Plus Query 146910 CTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCAC 146969 ||| | ||||| || |||| |||||||||||||||||||||||| |||| ||||| || Sbjct 54110 CTGCACTTTCAACGGTTCCATGTGGTTGAGGTAGACGTGCGCGTCGCCCAACGTGTGGAC 54169 Query 146970 AAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCT 147029 ||||| ||||||| || || || | ||| || | |||||| ||||| || | |||||| Sbjct 54170 GAAGTCGCCCGGCTGGAGTCCCGTGATGTGCGCGATCATGTACGTGAGGAGGGCGTAGCT 54229 Query 147030 GGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGA 147089 ||| |||||||| || || ||||||||||| || || || | ||||||||||||||| || Sbjct 54230 GGCGATGTTGAAAGGCACGCCCAGGCCCATATCGCCAGAGCGCTGGTACAGCTGGCAGGA 54289 Query 147090 GAGCTCCCCGTCGGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGC 147149 ||||| |||||| |||||| |||||||||||| ||||| || ||||||||||| Sbjct 54290 CAGCTCGCCGTCGCACACGTAGAACTGGCACAGGGCATGGCAGGGAGGCAGCGCCATCAG 54349 Query 147150 GGGCAGGTC 147158 |||||||| Sbjct 54350 AGGCAGGTC 54358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583215387112800