Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08]
37,377 sequences; 493,775,940 total letters
Query= NC_026430.1
Length=125767
Score E
Sequences producing significant alignments: (Bits) Value
seq1473 87.8 1e-12
>seq1473
Length=2736273
Score = 87.8 bits (96), Expect = 1e-12
Identities = 158/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319
||||| |||||||| || || | ||||| |||||||| || | || || | |
Sbjct 1454970 ATGCAGATTTTTGTGAAGACCCTTACTGGTAAGACCATCACTCTTGAGGTTGAGGACAGT 1455029
Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379
|| | |||| | |||||| ||||| ||||| ||||| | ||| |||||||
Sbjct 1455030 GACACGGTTGAGAATGTGAAAGCCAAAATCCAGGACAAGGAAGGAATTCCCCCTGATCAA 1455089
Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGAT--TCTAAAACTATGGGCGATTACA 106437
|| ||| | || | ||| |||||||||||||||||| | | ||| | |||||||
Sbjct 1455090 CAGAGGTTGATATTTGCTGGCAAACAATTAGAAGATGGCCGCACACTCT--CTGATTACA 1455147
Query 106438 ACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486
|||| || |||||||| || || ||| | || || | | ||||| ||
Sbjct 1455148 ACATCCAGAAAGAATCAACCCTCCATCTTGTCCTGCGTCTGCGAGGTGG 1455196
Score = 82.4 bits (90), Expect = 6e-11
Identities = 143/208 (69%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 106256 AAAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACC 106315
|||||||||||| ||||| || || | |||||||||||||| ||| | || |||
Sbjct 1452230 AAAAATGCAAATCTTTGTGAAGACCCTAACTGGCAAGACCATCACCCTTGAGGTTGAAGG 1452289
Query 106316 CGGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGA 106375
| | || |||||| | || ||| ||||| ||||| ||||| | || |||
Sbjct 1452290 CAGTGACACTGTTGAGAATGTTAAAGCCAAAATCCAGGACAAGGAAGGTATTCCTCCTGA 1452349
Query 106376 TCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTA 106435
||| |||||| | || | ||| |||||||| || |||||| || | || ||
Sbjct 1452350 TCAGCAAAGGTTGATCTTTGCTGGCAAACAGTTGGAAGATGGCCGCACCCTCTCTGACTA 1452409
Query 106436 CAACATACAAAAAGAATCTACACTACAT 106463
|||||| || ||||| || || || |||
Sbjct 1452410 CAACATCCAGAAAGAGTCCACCCTCCAT 1452437
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 402146325917216
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |