Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= NC_026923.1 Length=179110 Score E Sequences producing significant alignments: (Bits) Value seq19548 131 2e-25 >seq19548 Length=251 Score = 131 bits (144), Expect = 2e-25 Identities = 136/176 (77%), Gaps = 2/176 (1%) Strand=Plus/Minus Query 160217 GTGCTTACGATTTCGTGAGTCAGGAGATTA-GAGCAGCAGAAGATCCTGAATTTGAGACC 160275 |||| ||||| || || || || |||| | || ||||||||||| |||||||| || Sbjct 251 GTGCATACGACTTTGTATCACAAGA-ATTACGTGCTGCAGAAGATCCAGAATTTGAAACA 193 Query 160276 TTCTACACCAAGAACATCCTATTGAATGAAGGACTTCGTGCTTGGATGGCACCTGCTGAT 160335 ||||| || || || || |||| || ||||| ||||||| ||||||||| | ||| Sbjct 192 TTCTATACAAAAAATATTTTATTAAACGAAGGTATTCGTGCATGGATGGCAGCACAAGAT 133 Query 160336 CAACCACATGAAAACTTTATCTTCCCTGAGGAAGTACTACCTAGAGGTAACGCACT 160391 |||||||||||||||||| | ||||||||||| ||| |||| | || ||||| || Sbjct 132 CAACCACATGAAAACTTTGTATTCCCTGAGGAGGTATTACCACGTGGAAACGCCCT 77 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 572756276024400