Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= NC_026926.1 Length=192108 Score E Sequences producing significant alignments: (Bits) Value seq19548 98.7 1e-15 seq30401 87.8 2e-12 >seq19548 Length=251 Score = 98.7 bits (108), Expect = 1e-15 Identities = 129/176 (73%), Gaps = 2/176 (1%) Strand=Plus/Minus Query 183199 GTGCTTATGATTTTGTGAGTCAAGAGATTA-GAGCAGCAGAAGATCCTGAGTTCGAGACG 183257 |||| || || ||||| ||||| |||| | || ||||||||||| || || || || Sbjct 251 GTGCATACGACTTTGTATCACAAGA-ATTACGTGCTGCAGAAGATCCAGAATTTGAAACA 193 Query 183258 TTCTACACAAAGAACATCCTTCTCAATGAAGGACTACGTGCTTGGTTGGCACCTGCCGAT 183317 ||||| ||||| || || | | || ||||| | ||||| ||| ||||| | ||| Sbjct 192 TTCTATACAAAAAATATTTTATTAAACGAAGGTATTCGTGCATGGATGGCAGCACAAGAT 133 Query 183318 CAACCACATGAAAACTTCATCTTCCCTGAAGAAGTTCTACCTAGAGGTAACGCACT 183373 ||||||||||||||||| | |||||||| || || |||| | || ||||| || Sbjct 132 CAACCACATGAAAACTTTGTATTCCCTGAGGAGGTATTACCACGTGGAAACGCCCT 77 >seq30401 Length=595 Score = 87.8 bits (96), Expect = 2e-12 Identities = 67/78 (86%), Gaps = 1/78 (1%) Strand=Plus/Minus Query 161446 TGCGGGTGTAGCTCAGT-GGTAGAGCGTCAGTTTTCCAAACTGAATGTCGTCGGTTCAAG 161504 |||||| |||||||||| ||||||||||||| |||||| |||||||||| |||||| | Sbjct 574 TGCGGGAGTAGCTCAGTTGGTAGAGCGTCAGCCTTCCAAGCTGAATGTCGCCGGTTCGAA 515 Query 161505 TCCGATCTCCCGCTTTAA 161522 ||| ||||||||| ||| Sbjct 514 CCCGGTCTCCCGCTCTAA 497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 614330442974560