Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08]
37,377 sequences; 493,775,940 total letters
Query= NC_026926.1
Length=192108
Score E
Sequences producing significant alignments: (Bits) Value
seq19548 98.7 1e-15
seq30401 87.8 2e-12
>seq19548
Length=251
Score = 98.7 bits (108), Expect = 1e-15
Identities = 129/176 (73%), Gaps = 2/176 (1%)
Strand=Plus/Minus
Query 183199 GTGCTTATGATTTTGTGAGTCAAGAGATTA-GAGCAGCAGAAGATCCTGAGTTCGAGACG 183257
|||| || || ||||| ||||| |||| | || ||||||||||| || || || ||
Sbjct 251 GTGCATACGACTTTGTATCACAAGA-ATTACGTGCTGCAGAAGATCCAGAATTTGAAACA 193
Query 183258 TTCTACACAAAGAACATCCTTCTCAATGAAGGACTACGTGCTTGGTTGGCACCTGCCGAT 183317
||||| ||||| || || | | || ||||| | ||||| ||| ||||| | |||
Sbjct 192 TTCTATACAAAAAATATTTTATTAAACGAAGGTATTCGTGCATGGATGGCAGCACAAGAT 133
Query 183318 CAACCACATGAAAACTTCATCTTCCCTGAAGAAGTTCTACCTAGAGGTAACGCACT 183373
||||||||||||||||| | |||||||| || || |||| | || ||||| ||
Sbjct 132 CAACCACATGAAAACTTTGTATTCCCTGAGGAGGTATTACCACGTGGAAACGCCCT 77
>seq30401
Length=595
Score = 87.8 bits (96), Expect = 2e-12
Identities = 67/78 (86%), Gaps = 1/78 (1%)
Strand=Plus/Minus
Query 161446 TGCGGGTGTAGCTCAGT-GGTAGAGCGTCAGTTTTCCAAACTGAATGTCGTCGGTTCAAG 161504
|||||| |||||||||| ||||||||||||| |||||| |||||||||| |||||| |
Sbjct 574 TGCGGGAGTAGCTCAGTTGGTAGAGCGTCAGCCTTCCAAGCTGAATGTCGCCGGTTCGAA 515
Query 161505 TCCGATCTCCCGCTTTAA 161522
||| ||||||||| |||
Sbjct 514 CCCGGTCTCCCGCTCTAA 497
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 614330442974560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |