Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq19548 102 1e-16 >seq19548 Length=251 Score = 102 bits (112), Expect = 1e-16 Identities = 128/173 (74%), Gaps = 2/173 (1%) Strand=Plus/Minus Query 176689 GTGCTTATGATTTTGTGAGCCAAGAGATTA-GAGCAGCAGAAGATCCTGAGTTTGAAACT 176747 |||| || || ||||| ||||| |||| | || ||||||||||| || |||||||| Sbjct 251 GTGCATACGACTTTGTATCACAAGA-ATTACGTGCTGCAGAAGATCCAGAATTTGAAACA 193 Query 176748 TTCTACACAAAGAACATCCTTCTTAACGAAGGACTAAGAGCATGGATGGCACCTGTGGAT 176807 ||||| ||||| || || | | |||||||| | | |||||||||||| | ||| Sbjct 192 TTCTATACAAAAAATATTTTATTAAACGAAGGTATTCGTGCATGGATGGCAGCACAAGAT 133 Query 176808 CAACCACATGAGTCATTTGTATTCCCAGAAGAAGTTCTACCTAGAGGTAACGC 176860 ||||||||||| ||||||||||| || || || |||| | || ||||| Sbjct 132 CAACCACATGAAAACTTTGTATTCCCTGAGGAGGTATTACCACGTGGAAACGC 80 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729588567766760