Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= NC_027130.1 Length=172688 Score E Sequences producing significant alignments: (Bits) Value seq19548 109 6e-19 >seq19548 Length=251 Score = 109 bits (120), Expect = 6e-19 Identities = 135/182 (74%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 160737 GTGCTTACGATTTCGTGAGTCAAGAGATTA-GAGCAGCAGAAGATCCAGAATTTGAGACC 160795 |||| ||||| || || ||||| |||| | || |||||||||||||||||||| || Sbjct 251 GTGCATACGACTTTGTATCACAAGA-ATTACGTGCTGCAGAAGATCCAGAATTTGAAACA 193 Query 160796 TTCTACACCAAGAACATCCTACTGAATGAAGGACTACGTGCATGGTTAGCACCTGCCGAC 160855 ||||| || || || || || | || ||||| | ||||||||| | ||| | || Sbjct 192 TTCTATACAAAAAATATTTTATTAAACGAAGGTATTCGTGCATGGATGGCAGCACAAGAT 133 Query 160856 CAACCCCATGAGAACTTTATCTTCCCAGAAGAAGTTCTTCCTAGAGGCAACGCCCTTTAA 160915 ||||| ||||| |||||| | ||||| || || || | || | || |||||||||||| Sbjct 132 CAACCACATGAAAACTTTGTATTCCCTGAGGAGGTATTACCACGTGGAAACGCCCTTTAA 73 Query 160916 TA 160917 || Sbjct 72 TA 71 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552215477428160