Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08]
37,377 sequences; 493,775,940 total letters
Query= NC_027132.1
Length=190768
Score E
Sequences producing significant alignments: (Bits) Value
seq19548 104 3e-17
seq30401 87.8 2e-12
>seq19548
Length=251
Score = 104 bits (114), Expect = 3e-17
Identities = 126/172 (73%), Gaps = 0/172 (0%)
Strand=Plus/Minus
Query 180859 GTGCTTACGATTTCGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCTGAGTTCGAGACGT 180918
|||| ||||| || || ||||| | | || ||||||||||| || || || || |
Sbjct 251 GTGCATACGACTTTGTATCACAAGAATTACGTGCTGCAGAAGATCCAGAATTTGAAACAT 192
Query 180919 TCTACACCAAGAACATCCTATTGAATGAAGGACTACGTGCATGGTTGGCACCTGCCGATC 180978
|||| || || || || |||| || ||||| | ||||||||| ||||| | ||||
Sbjct 191 TCTATACAAAAAATATTTTATTAAACGAAGGTATTCGTGCATGGATGGCAGCACAAGATC 132
Query 180979 AACCACACGAAAACTTCATCTTCCCTGAAGAAGTTCTACCAAGAGGTAACGC 181030
||||||| |||||||| | |||||||| || || ||||| | || |||||
Sbjct 131 AACCACATGAAAACTTTGTATTCCCTGAGGAGGTATTACCACGTGGAAACGC 80
>seq30401
Length=595
Score = 87.8 bits (96), Expect = 2e-12
Identities = 67/78 (86%), Gaps = 1/78 (1%)
Strand=Plus/Minus
Query 155855 TGCGGGTGTAGCTCAGT-GGTAGAGCGTCAGTTTTCCAAACTGAATGTCGTCGGTTCAAG 155913
|||||| |||||||||| ||||||||||||| |||||| |||||||||| |||||| |
Sbjct 574 TGCGGGAGTAGCTCAGTTGGTAGAGCGTCAGCCTTCCAAGCTGAATGTCGCCGGTTCGAA 515
Query 155914 TCCGATCTCCCGCTTTAA 155931
||| ||||||||| |||
Sbjct 514 CCCGGTCTCCCGCTCTAA 497
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 610044446381760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |