Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq1148 100 9e-16 >seq1148 Length=2189075 Score = 100 bits (110), Expect = 9e-16 Identities = 197/287 (69%), Gaps = 6/287 (2%) Strand=Plus/Minus Query 254981 CCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAACGC 255040 || ||| | ||||| | ||||||| ||| |||||||| || || || ||| ||| || Sbjct 534181 CCCATGCTGCGTGTCTACAACAACACGGCGCGCTACGTGGACCAGGGAGGCAACAAGCGG 534122 Query 255041 CCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACA--TTGAACGGTTTTTAC 255098 || || || ||| |||| |||||||||||||||||| |||| || || || | Sbjct 534121 CCCGGCGCCTTCGCCATGTACCTGGAGCCGTGGCACTTTGACATCTTCGAC--TTCCTGG 534064 Query 255099 TGCTGTCCGACAAGACCGGCACCGAGGAGCTGATCGCCCGCGACATCTACACCGCTGTCT 255158 |||| | || || |||| ||||||| | |||||| ||| | | | || | ||| Sbjct 534063 AGCTGAAGAAGAACACAGGCAAAGAGGAGCAGCGCGCCCGTGACCTGTTCTTCGGTCTCT 534004 Query 255159 GGTGCTGCGATCTGTTTATGCGACGCGTGGAACGAGACGAGACCTGGAGCCTCATGTGTC 255218 || | |||||||| ||| | || || | || || |||| ||||||||| Sbjct 534003 GGATCCCAGATCTGTTCATGAAGAGGGTAGAGAGCAACCAGGACTGGTCGCTCATGTGT- 533945 Query 255219 CCAACTTATCGCCC-GGTCTAGTCGACTCTTGGGGTGACGAGTTTGA 255264 |||| | | |||| || || | ||| | |||||||| |||||||| Sbjct 533944 CCAAATGAGTGCCCTGGCCTGGACGAGTGCTGGGGTGATGAGTTTGA 533898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1587575357305765