Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08]
37,377 sequences; 493,775,940 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq1148 132 6e-26
seq1247 84.2 3e-11
>seq1148
Length=2189075
Score = 132 bits (146), Expect = 6e-26
Identities = 551/857 (64%), Gaps = 43/857 (5%)
Strand=Plus/Plus
Query 111251 TTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAA 111310
||||| || ||| ||| |||| ||||| || | || || || || | ||||
Sbjct 533667 TTGCACACGGCCACCTCGTCCTGGCTGGTGTATTCGACGATCTCCGTGCACAGGTTGCTG 533726
Query 111311 CTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGC 111370
| ||| || || |||| |||| ||||| ||||| ||||| |||||||||||||||
Sbjct 533727 CACTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTGCGATTGCATGCATCCTTGTAGAGC 533786
Query 111371 ATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAACATCGGCGGCT 111430
||||| ||||| |||||||| ||||| || | || || || | ||| || | ||||
Sbjct 533787 ATGTACGGCGTGCCCGTCTCTGTCTGAGACTCGATGATGGCGTACCACACCTGCTGGGCT 533846
Query 111431 GGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCC 111490
|| | ||| |||| |||||| ||| || |||||| | || ||||||||
Sbjct 533847 TTCACCACCCGCTTGACCCGGCCCTCCTTCTCATAGCGTGTGTACAAAGCCTCAAACTCA 533906
Query 111491 TCACCCACCGC-GTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACC 111549
|||||| | || ||| || || || || | |||||| | || ||||| | ||
Sbjct 533907 TCACCC-CAGCACTCGTCCAGGCCAGGGCACTCATTTGGACACATGAGCGACCA--GTCC 533963
Query 111550 ACCTT--CCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCT 111607
|| ||| |||| ||||||||| || ||||| ||||| || | || || ||
Sbjct 533964 TGGTTGCTCTCTACCCTCTTCATGAACAGATCTGGGATCCAGAGACCGAAGAACAGGTCA 534023
Query 111608 CTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGT-AACTCAAGGAACTCCATGATATC 111666
| || ||| || | ||| ||| || | | ||| ||||| || | ||| ||
Sbjct 534024 CGGGCGCGCTGCTCCTCTTTGCCTGTGTT-CTTCTTCAGCTCCAGGAAGTCGAAGATGTC 534082
Query 111667 CGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC------CTT-TCGACGCCCAGCTT 111719
|||||| ||||| || || | |||| | || ||| | | | ||| |
Sbjct 534083 AAAGTGCCACGGCTCCAGGTACATGGCGAAGGCGCCGGGCCGCTTGTTGCCTCCC----T 534138
Query 111720 GATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATT 111779
| | || |||||||| ||| ||| | || || ||||| || | | || | || |
Sbjct 534139 GGTCCACGTAGCGCGCCGTGTTGTTGTAGACACGCAGCATGGGCACCAGGCCGTTGGAGT 534198
Query 111780 GACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCA---CATC--ATGGATGTG--- 111831
||||| || || | ||| || ||| || | | ||| | ||
Sbjct 534199 TGCCATTGGTGCC-------GGCGATGTA---GCTGCCAGTGGAACGGATGCAGCTGACC 534248
Query 111832 --CATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAG 111889
|| || || || || ||| | || ||||| | ||||||| | | || || | |||
Sbjct 534249 GCCACGCCGATGCCACCTGCCGATTTGGAGATGAGGGCACACTGCTTGAGCGTGTCGTAG 534308
Query 111890 ATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTC-- 111947
|| || | ||| ||| ||||| |||| | |||||||| ||||||| ||| || |
Sbjct 534309 ATGCCATCGATGCTGTCGTCCTTCATGGCTAGCAGGAAGCAGCTGGACAACTGTGGCCGG 534368
Query 111948 TTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCT 112007
|||||| ||||| ||||| || || |||| ||||| ||||| | | || | |
Sbjct 534369 TTGGTG--CCAGCGTTGAAAAGAGTGGGTGAGGCGTGCGTGAACCATCTCTCTGAAAGCA 534426
Query 112008 TGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCA 112067
|| ||| ||||| | | | | ||| | | | ||||||||||| | || |||||||
Sbjct 534427 GGTTGTACGTCTCAATGGCGGCATCCACGCGCGCGCCGTGGATGCCCACCGCCACCCGCA 534486
Query 112068 TGAACATGTACTGTGGG 112084
| | ||||| ||| |||
Sbjct 534487 TCAGCATGTGCTGCGGG 534503
>seq1247
Length=1231281
Score = 84.2 bits (92), Expect = 3e-11
Identities = 100/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 122678 CCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTTCT 122737
|||| || ||| || || || || ||| || || || |||||||| || | ||||
Sbjct 216350 CCTCGTCCCGGCTGATGAGCTCGTTGGAGTAGGTGAGGCCGGGCATGAGGCCTCTTTTCT 216409
Query 122738 TCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAACG 122797
||||||| || || ||| ||| || |||||||||||||| |||||||| ||||| |
Sbjct 216410 TCAACCAGTAGATGGCGGCGAAGGAGCCGGAGAAGAAGATGCCCTCCACCGCTGCAAAAG 216469
Query 122798 CAAAAAGGCGTTCGGC 122813
| | ||| || |||||
Sbjct 216470 CCACAAGTCGCTCGGC 216485
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 627738575599200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |