Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08]
37,377 sequences; 493,775,940 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq1148 214 2e-50
>seq1148
Length=2189075
Score = 214 bits (236), Expect = 2e-50
Identities = 838/1300 (64%), Gaps = 32/1300 (2%)
Strand=Plus/Plus
Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241
|| || ||| | ||||| | ||||| | |||| ||||| || | ||| || || ||||||
Sbjct 533127 TATATGTTGCTGGTGTACGCCTCAATGGACTCGTTGTTGCCAAGGATCTGCGCAGTGGAG 533186
Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301
|| ||||||||||| |||| || |||||||| | | ||| | | || |||
Sbjct 533187 GCGGTGGGCATGGGCGCCAGCAGCAGGCTGTTTCTCACACCGTGCTTGGCGATCTTCTCC 533246
Query 118302 TTGAG-AGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAG 118360
||||| | |||| |||| | || | | || ||||||||| ||| |||||||
Sbjct 533247 TTGAGTAATGTCC-AGTCCCACAGCGGCGTGGGAATCCGCTGCCACATGTCATACTGGAG 533305
Query 118361 GATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAA 118420
||| || | | | || || ||| | ||||| || ||||| | | | ||||
Sbjct 533306 GATCCCCTTGCTGACAGGAGAGCCCGGGTACGTCTCGTAGGGGCCGTGCTCAGCGGCCAG 533365
Query 118421 TTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGC 118480
||| |||| ||||| || || |||| || | || || || || || ||| | |
Sbjct 533366 CTCGCAGCTGGCCTCCAGCGCGGCGTAGTAGAGAGTCTCGAAGATCTGAATATTGAGTAG 533425
Query 118481 CTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTG 118540
| |||||| | ||||| | | || | ||| || | || || || || ||
Sbjct 533426 TTGCGCCTCGGGGCTCTCAAAGGGCTGCCGCATGAGAATGAAGGCGTCGGCCAGCCCCTG 533485
Query 118541 GACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTC---CACGGG 118597
||| |||| |||||| || || || | ||| || || | | || ||| ||| ||
Sbjct 533486 GACGCCGATGCCAATGGGCCGGTGGCGCATGTTGGAGCGCTGCGC---CTCAGGCACCGG 533542
Query 118598 ATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATG 118657
|| | || | ||||| | ||| || || || ||| || || || |||| |
Sbjct 533543 GTAGTAGTTGATGTCGATGATCCTGTTGAGGTTCTTGACGATGACTTTGGTGACGGCCGC 533602
Query 118658 AAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGA 118717
||||| | | | || | |||| ||| |||| ||| | || || | ||
Sbjct 533603 CAGCTTCTTGAAGTCGTATGTGCG---CTCGGGGGTGACGTACATGTTGAGCGCCACGGA 533659
Query 118718 CGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAA 118777
|| || || ||||| | ||| |||| ||||| || | || ||||||||||
Sbjct 533660 GGCTAGGTTGCACACGGCCACCTCGTCCTGGCTGGTGTATTCGACGATCTCCGTGCACAG 533719
Query 118778 GTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTT 118837
||| | ||| |||||||||| ||||| || || ||| || || ||||||||
Sbjct 533720 GTTGCTGCACTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTGCGATTGCATGCATCCTT 533779
Query 118838 GTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATC 118897
||| |||||||| ||||| |||||||| || || |||| || || || | ||| || |
Sbjct 533780 GTAGAGCATGTACGGCGTGCCCGTCTCTGTCTGAGACTCGATGATGGCGTACCACACCTG 533839
Query 118898 GGCAGCTGGCA-CAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTT 118956
||| || || || ||| | || ||||| | ||| || |||||| | || |
Sbjct 533840 CTGGGCTTTCACCACCCGC-TTGACCCGGCCCTCCTTCTCATAGCGTGTGTACAAAGCCT 533898
Query 118957 CAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACC 119016
||||||| |||||| | ||| || || || || || ||| || | ||| ||||
Sbjct 533899 CAAACTCATCACCCCAGCACTCGTCCAGGCCAGGGCACTCATTTGGACACATGAGCGACC 533958
Query 119017 ATTGACCACCCT--CCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAA 119074
| | || | ||| |||| ||||||||| || |||||||||||||| | ||||
Sbjct 533959 A--GTCCTGGTTGCTCTCTACCCTCTTCATGAACAGATCTGGGATCCAGAGACCGAAGAA 534016
Query 119075 GAGATCCCGACAGCG-AGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCA 119133
|| || || ||| ||| || | || || || || ||||| ||||| |
Sbjct 534017 CAGGTCACGGGCGCGCTGCTCCTCTTTGCCTGTG-TTCTTCTTCAGCTCCAGGAAGTCGA 534075
Query 119134 TGATATCCGCGTGCCACGGTTCCAGGTACACCGCGA------TTGACCCCTTACGACGAC 119187
||| || ||||||||| |||||||||| |||| | || ||| | | |
Sbjct 534076 AGATGTCAAAGTGCCACGGCTCCAGGTACATGGCGAAGGCGCCGGGCCGCTT--GTTG-C 534132
Query 119188 CAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCAT 119247
| |||||| || || | ||| ||| ||| | ||||| ||||| || | | || |
Sbjct 534133 CTCCCTGGTCCACGTAGCGCGCCGTGTTGTTGTAGACACGCAGCATGGGCACCAGGCCGT 534192
Query 119248 CGGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCGTGGATGTG 119305
||| | |||||| || || ||| || | | | ||| | || | ||
Sbjct 534193 TGGAGTTGCCATTGGTGCCGGCGATGTAGCTGCC--AGTGGAACGGATGCAGCTGACCGC 534250
Query 119306 CATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGAT 119365
|| || || || |||||| | || ||||| | || |||| | |||| || |||||||
Sbjct 534251 CACGCCGATGCCACCTGCCGATTTGGAGATGAGGGCACACTGCTTGAGCGTGTCGTAGAT 534310
Query 119366 CCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGG 119425
|||||||| ||| |||| | || | ||||||||||| |||| || |||| |
Sbjct 534311 GCCATCGATGCTGTCGTCCTTCATGGCTAGCAGGAAGCAGCTGGACAACTGTGGCCGGTT 534370
Query 119426 TGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAAC 119465
|| ||||||||||| ||||| |||| ||||| |||||
Sbjct 534371 GGTGCCAGCGTTGAAAAGAGTGGGTGAGGCGTGCGTGAAC 534410
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618146259344120
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