Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq1473 168 2e-36 seq809 168 2e-36 seq1298 145 2e-29 seq10769 109 2e-18 seq227 109 2e-18 >seq1473 Length=2736273 Score = 168 bits (186), Expect = 2e-36 Identities = 176/231 (76%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| ||||| || | | || ||||||||||| |||||||||||||| || || || || Sbjct 1454288 CATGCCACCTCGCAGACGCAGGACAAGATGAAGGGTAGACTCTTTTTGGATGTTGTAGTC 1454229 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 |||||| || || |||||||| | ||| || ||||||||||| | | ||||||||||| Sbjct 1454228 AGATAAGGTGCGTCCATCTTCTAATTGCTTACCAGCAAAGATCAACCTCTGCTGATCAGG 1454169 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||||| ||||| || ||||| |||||||| || ||||| |||| | ||| || Sbjct 1454168 GGGAATGCCTTCCTTGTCCTGGATTTTAGCCTTCACATTCTCAACAGTGTCACTGCCCTC 1454109 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| || | ||||| || || || || |||||||| |||||||| Sbjct 1454108 GACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTTACAAAGATCTGCAT 1454058 Score = 168 bits (186), Expect = 2e-36 Identities = 176/231 (76%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| ||||| |||| | || || |||||||| |||| ||| ||||| || || ||||| Sbjct 1454972 CATGCCACCTCGTAGACGCAGGACGAGATGAAGCGTAGCCTCCTTTTGGATGTTGTAATC 1454913 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | || || |||||||| || || |||||||||||||| || | ||| || ||||| Sbjct 1454912 AGAGAGGGTACGGCCATCTTCTAGCTGCTTTCCAGCAAAGATCAGCCTTTGTTGGTCAGG 1454853 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||||| ||||| || ||||| |||||||| || ||||| |||| | |||| | ||| Sbjct 1454852 GGGAATACCTTCCTTGTCCTGGATTTTAGCCTTGACATTCTCAACTGTATCATTGGCTTC 1454793 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||| ||||| || | ||||| || || || || || ||||| | |||||| Sbjct 1454792 AACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACAAACAACTGCAT 1454742 Score = 161 bits (178), Expect = 3e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570 |||||||| | | || |||||||| || || ||||| ||||| || || || || || Sbjct 2588184 CCACCACGCAGACGCAGGACAAGATGGAGGGTGGACTCCTTTTGGATGTTGTAGTCTGAC 2588125 Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630 | ||| || |||||||| ||||| || ||||||||||| | | ||||| || || ||| Sbjct 2588124 AGTGTGCGGCCATCTTCTAGTTGCTTGCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGA 2588065 Query 140631 ATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACT 140690 || ||||| || ||||| ||||| ||||| ||||| ||||| | ||| |||||||| Sbjct 2588064 ATGCCTTCCTTGTCCTGGATTTTGGCTTTGACATTCTCAATGGTGTCACTGGGTTCAACC 2588005 Query 140691 TCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| || | |||||| || || || || || || || |||||||| Sbjct 2588004 TCAAGGGTGATTGTCTTGCCAGTGAGCGTCTTCACGAAGATCTGCAT 2587958 Score = 159 bits (176), Expect = 1e-33 Identities = 163/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || |||||||| || || |||||||| || || || || ||||| | || || |||||| Sbjct 1452445 AGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCT 1452386 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || | ||||| ||||||||||| | | |||||||||||||||||| ||||| || ||| Sbjct 1452385 TCCAACTGTTTGCCAGCAAAGATCAACCTTTGCTGATCAGGAGGAATACCTTCCTTGTCC 1452326 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || ||||| ||||| ||||| |||| | ||| |||||| ||||| || | ||| Sbjct 1452325 TGGATTTTGGCTTTAACATTCTCAACAGTGTCACTGCCTTCAACCTCAAGGGTGATGGTC 1452266 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 || || ||||| || || ||||| || |||||| Sbjct 1452265 TTGCCAGTTAGGGTCTTCACAAAGATTTGCATT 1452233 Score = 158 bits (174), Expect = 4e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || |||||||| || || || ||||| || || || |||||||| | ||| || |||||| Sbjct 1455181 AGGACAAGATGGAGGGTTGATTCTTTCTGGATGTTGTAATCAGAGAGTGTGCGGCCATCT 1455122 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || | |||||| |||||||| || | | || |||||||| ||||||||||| || ||| Sbjct 1455121 TCTAATTGTTTGCCAGCAAATATCAACCTCTGTTGATCAGGGGGAATTCCTTCCTTGTCC 1455062 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || ||||| ||||| ||||| |||| || ||| ||||| ||||| || | ||| Sbjct 1455061 TGGATTTTGGCTTTCACATTCTCAACCGTGTCACTGTCCTCAACCTCAAGAGTGATGGTC 1455002 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || || || |||||||||||||| Sbjct 1455001 TTACCAGTAAGGGTCTTCACAAAAATCTGCAT 1454970 Score = 156 bits (172), Expect = 1e-32 Identities = 181/243 (74%), Gaps = 1/243 (0%) Strand=Plus/Minus Query 140495 ACTAATATTTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTG 140554 || ||||||| ||| ||||| || | | | |||||||| || || ||||| || || Sbjct 1453387 ACAAATATTTG-CATGCCACCTCGCAGACGCAAGACAAGATGGAGGGTGGACTCCTTCTG 1453329 Query 140555 AATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACG 140614 ||| || || || || | || || |||||||| |||||||| |||||||| || | | Sbjct 1453328 AATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGTTGTTTGCCAGCAAATATCAACCT 1453269 Query 140615 TTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGA 140674 || || ||||||||||| |||||||| ||||| ||||| || || ||||| |||| | Sbjct 1453268 CTGTTGGTCAGGAGGAATGCCTTCTTTGTCCTGGATTTTGGCCTTCACATTCTCAACTGT 1453209 Query 140675 ATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTG 140734 ||| ||||| ||||| || || ||||| || ||||| || |||||||| ||||| Sbjct 1453208 GTCACTCCCCTCAACCTCAAGAGTGACGGTCTTGCCAGTTAGGGTCTTTACAAAGATCTG 1453149 Query 140735 CAT 140737 ||| Sbjct 1453148 CAT 1453146 Score = 152 bits (168), Expect = 2e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || |||||||| ||||| ||||| || || || || || || |||| ||| || |||||| Sbjct 2587941 AGGACAAGATGGAGAGTTGACTCCTTCTGGATGTTGTAGTCTGATAGTGTACGGCCATCT 2587882 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || ||||| || ||||||||||| | | ||||| || || ||||| ||||| || ||| Sbjct 2587881 TCTAGTTGCTTGCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCC 2587822 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || ||||| ||||| ||||| || || | ||| |||||||| ||||| || | ||| Sbjct 2587821 TGGATTTTGGCTTTGACATTCTCGATGGTGTCACTGGGTTCAACCTCAAGGGTTATGGTC 2587762 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || || || || || |||||||| Sbjct 2587761 TTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 2587730 Score = 150 bits (166), Expect = 5e-31 Identities = 172/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| ||||| || | | || |||||||| || || ||||| || || || || || || Sbjct 1453832 CATGCCACCTCGCAGACGCAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 1453773 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | || || |||||||| |||||||| |||||||| || | | || || ||||| Sbjct 1453772 AGAGAGGGTCCGTCCATCTTCCAGTTGTTTGCCAGCAAATATCAACCTCTGTTGGTCAGG 1453713 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||| |||||||| ||||||||||| || || || || |||| | |||| || Sbjct 1453712 AGGAATGCCTTCTTTGTCCTGAATTTTGGCCTTCACGTTCTCAACAGTATCACTCCCCTC 1453653 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||| ||||| || || ||||| || ||||| || || ||||| || ||||| Sbjct 1453652 AACCTCAAGAGTGACAGTCTTGCCAGTTAGGGTCTTCACAAATATTTGCAT 1453602 Score = 147 bits (162), Expect = 7e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| ||||| || | | || |||||||| || || |||||||| || || || || || Sbjct 1452920 CATGCCACCTCGCAGACGCAGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTC 1452861 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | || || |||||||| |||||||| |||||||| || | | ||||| ||||| Sbjct 1452860 AGAGAGGGTGCGGCCATCTTCCAGTTGTTTGCCAGCAAATATCAACCTCTGCTGGTCAGG 1452801 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||| |||||||| ||||||||||| | || ||||| |||| | ||| || Sbjct 1452800 AGGAATGCCTTCTTTGTCCTGAATTTTCACCTTGACATTTTCAACAGTGTCACTGTCCTC 1452741 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||| ||||| || | || || || || || || || ||||| |||||||| Sbjct 1452740 AACCTCAAGGGTGATGGTTTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 1452690 Score = 147 bits (162), Expect = 7e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 140529 ACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCA 140588 |||||||| || || ||||| || || || || || ||||| | | || |||||||| Sbjct 1453126 ACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGAGCGGCCATCTTCC 1453067 Query 140589 AGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGA 140648 |||||||| |||||||| || | | || || ||||||||||| |||||||| ||||| Sbjct 1453066 AGTTGTTTGCCAGCAAATATCAACCTCTGTTGGTCAGGAGGAATGCCTTCTTTGTCCTGG 1453007 Query 140649 ATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTT 140708 ||||| || || ||||| |||| | ||| ||||| ||||| || || ||||| Sbjct 1453006 ATTTTGGCCTTCACATTCTCAACTGTGTCACTCCCCTCAACCTCAAGAGTGACGGTCTTG 1452947 Query 140709 CCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| || |||||||| |||||||| Sbjct 1452946 CCAGTTAGGGTCTTTACAAAGATCTGCAT 1452918 Score = 147 bits (162), Expect = 7e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| ||||| || | | || |||||||| || || || || || || || || || || Sbjct 1454060 CATGCCACCTCGCAGACGCAGGACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTC 1454001 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | || || |||||||| |||||||| |||||||| || | | || || ||||| Sbjct 1454000 AGAGAGAGTGCGGCCATCTTCCAGTTGTTTGCCAGCAAATATCAACCTCTGTTGGTCAGG 1453941 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||| ||||| || ||||| ||||| || || ||||| |||| | ||| | || Sbjct 1453940 AGGAATGCCTTCCTTGTCCTGGATTTTGGCCTTCACATTCTCAACAGTGTCACTTCCCTC 1453881 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||||||| || | ||||| || || || ||||| ||||| |||||||| Sbjct 1453880 AACTTCAAGGGTGATGGTCTTGCCAGTAAGGGTTTTCACAAATATCTGCAT 1453830 Score = 140 bits (154), Expect = 1e-27 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || |||||||| || || ||||| || || || || || ||||| | || || || ||| Sbjct 2590190 AGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGAGTGCGACCGTCT 2590249 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || ||||||||||| | | ||||| ||||| ||||| ||||| || ||| Sbjct 2590250 TCCAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCAGGTGGAATGCCTTCCTTGTCC 2590309 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || ||||| ||||| ||||| ||||| | ||| || ||||| || || || | ||| Sbjct 2590310 TGGATTTTGGCTTTGACATTCTCAATAGTGTCACTGGGCTCAACCTCGAGGGTGATGGTC 2590369 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || || || ||||| |||||||| Sbjct 2590370 TTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 2590401 Score = 138 bits (152), Expect = 3e-27 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| ||||| | || | || |||||||||||||||| || ||||| || || || || Sbjct 1454744 CATGCCACCTCTCAAACGCAGGACAAGATGAAGAGTAGCTTCCTTTTGGATGTTGTAGTC 1454685 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | || || || | | || ||||| ||||||||||| || | || |||| ||| Sbjct 1454684 AGAGAGGGTGCGATCACATCCCAGCTGTTTGCCAGCAAAGATCAGCCTCTGGTGATGAGG 1454625 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||||| ||||| || || | ||||| ||||| ||||| |||| | |||| || Sbjct 1454624 CGGAATACCTTCCTTGTCTTTGATTTTGGCTTTGACATTCTCAACAGTATCACTGCCCTC 1454565 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| || | |||||| || ||||| ||||| ||||| |||||||| Sbjct 1454564 GACCTCAAGAGTGATTGTCTTGCCAGTTAGGGTTTTCACAAAGATCTGCAT 1454514 Score = 123 bits (136), Expect = 8e-23 Identities = 174/243 (72%), Gaps = 1/243 (0%) Strand=Plus/Minus Query 140495 ACTAATATTTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTG 140554 || ||||||| ||| ||||| || | | | |||||||| || || ||||| || || Sbjct 1453615 ACAAATATTTG-CATGCCACCTCGCAGACGCAAGACAAGATGGAGGGTGGACTCCTTCTG 1453557 Query 140555 AATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACG 140614 || || || ||||| | || || |||||||| |||||||| |||||||| || | | Sbjct 1453556 GATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCGAGTTGTTTGCCAGCAAATATCAACCT 1453497 Query 140615 TTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGA 140674 || || ||||||||||| |||||||| ||||||||||| | || ||||| || | | Sbjct 1453496 CTGTTGGTCAGGAGGAATGCCTTCTTTGTCCTGAATTTTGACCTTCACATTTTCCACAGT 1453437 Query 140675 ATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTG 140734 ||| ||||| || || || | || || || || || || || ||||| || || Sbjct 1453436 GTCACTGTCCTCAACCTCTAGGGTGATAGTTTTGCCAGTGAGGGTCTTCACAAATATTTG 1453377 Query 140735 CAT 140737 ||| Sbjct 1453376 CAT 1453374 >seq809 Length=886213 Score = 168 bits (186), Expect = 2e-36 Identities = 363/540 (67%), Gaps = 2/540 (0%) Strand=Plus/Minus Query 349766 aaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAA 349825 ||| | ||||| |||||| | || ||||| || |||||||| ||| | | ||| ||||| Sbjct 476506 AATGTGCTTATCTTTGATCTTGGGGGTGGCACCTTTGATGTGTCAATTTTGACAATTGAA 476447 Query 349826 GAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTT 349885 || ||||| ||||| ||||| | || ||||| ||||| ||||||||||| ||||||||| Sbjct 476446 GATGGAATCTTTGAGGTTAAGTCCACAGCTGGCGATACCCATCTTGGTGGGGAAGATTTT 476387 Query 349886 GATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAG-CTAAAATTGATAT 349944 || || || | || || || || || || ||||| |||| || | || || Sbjct 476386 GACAACCGCATGGTCAACCACTTCATTGCGGAGTTCAAGCG-CAAGTACAAGAAAGACAT 476328 Query 349945 TGGAGATAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTC 350004 | || || |||| ||||||| || | || || || || | || ||||| | Sbjct 476327 CAGTGACAACAAGCGAGCCGTGCGTCGTCTGCGCACAGCATGCGAGAGGGCAAAGCGCAC 476268 Query 350005 CTTATCATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTT 350064 ||| || || | || || || |||||||||||| ||||| ||| || ||||| Sbjct 476267 CTTGTCTTCCAGCACTCAGGCCAGTATTGAAATTGACTCTCTGTATGAGGGAGTTGATTT 476208 Query 350065 CTTTTCATCTATTACACGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAAC 350124 || | || || || | ||||| ||||| ||| | | || || || | | || Sbjct 476207 CTACACCTCCATCACCAGAGCTCGCTTTGAGGAACTCAATGCTGACCTCTTCCGTGGGAC 476148 Query 350125 AATGGATCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGA 350184 |||| || ||||| ||| | | ||||| || ||| |||| | ||| |||| Sbjct 476147 CTTGGACCCCGTGGAGAAATCACTGCGTGATGCCAAGATGGACAAAGGGCTAATTCATGA 476088 Query 350185 AGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTT 350244 | || || ||||| || || || || || || ||| | ||| || | || || || Sbjct 476087 CATTGTCTTGGTTGGCGGCTCCACTCGCATCCCCAAAATCCAAAAGCTGCTGCAGGACTT 476028 Query 350245 TTTTAATGGCAAAGAACCTTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGC 350304 || ||||||||||| | | | || || ||||||||||||||||| ||||| || Sbjct 476027 CTTCAATGGCAAAGAGCTGAACAAAAGCATCAACCCAGATGAAGCTGTTGCCTATGGGGC 475968 Score = 109 bits (120), Expect = 2e-18 Identities = 90/110 (82%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 183681 TCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCCG 183740 ||||||||||| ||||| | ||| ||||||||||| || | ||||| ||||| ||||| Sbjct 476385 TCAAAATCTTCCCCACCAAGATGGGTATCGCCAGCTGTGGACTTAACCTCAAAGATTCCA 476444 Query 183741 TCTTCAATATTTAAAATTGATACATCAAATGTACCACCACCCAAATCAAA 183790 |||||||| | |||||||| |||||||| || ||||| || | |||||| Sbjct 476445 TCTTCAATTGTCAAAATTGACACATCAAAGGTGCCACCCCCAAGATCAAA 476494 Score = 96.9 bits (106), Expect = 1e-14 Identities = 106/141 (75%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 349608 ATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATG 349667 ||||||||||||| || || ||||| || |||||| |||| || || |||||||||| Sbjct 477249 ATGCTGTTATTACGGTGCCCGCCTACTTCAATGATTCCCAACGCCAGGCTACAAAAGATG 477190 Query 349668 CTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAA 349727 | || | || | ||| | |||||||| | || || |||||||| ||||| || || | Sbjct 477189 CAGGAACAATCTCTGGGCTCAATGTTCTGCGTATCATCAATGAACCAACTGCAGCTGCTA 477130 Query 349728 TTGCATATGGGCTTGATAAAA 349748 | |||||||| | || |||| Sbjct 477129 TCGCATATGGCTTGGACAAAA 477109 >seq1298 Length=9711636 Score = 145 bits (160), Expect = 2e-29 Identities = 716/1129 (63%), Gaps = 23/1129 (2%) Strand=Plus/Plus Query 349198 CGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCG 349257 ||| || || ||||| | || || || || || || || | ||||| || ||| Sbjct 332317 CGCAATCGGCATCGACCTGGGCACCACGTACTCCTGCGTGGGTGTTTTCCAGCATGGCAA 332376 Query 349258 TGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTAC 349317 || || || || || || || || || ||||| || || || ||||| || || || Sbjct 332377 AGTGGAGATCATCGCCAACGACCAGGGCAACAGGACCACACCCAGCTACGTGGCGTTCAC 332436 Query 349318 CGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAA 349377 ||| || ||| | | || || || | || ||||| |||| || || || | || Sbjct 332437 CGACACCGAGAGGCTCATCGGCGACGCCGCCAAAAACCAAGTGGCGTTGAACCCCAGCAA 332496 Query 349378 TACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGA-CAAATCTACACAAT 349436 || || ||||| || |||||||| || || || || ||| || | || | ||| Sbjct 332497 CACTGTGTTTGACGCCAAGCGACTGATCGGAAGGAGGTTTGACGATCCTGTCGTC-CAAG 332555 Query 349437 CTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTG 349496 | || || |||| || || | || || | || || | || | | || Sbjct 332556 CAGACAGGAAGCATTGGCCCTTCAAGGTAGTCGCT---GATGGAGGCAAGGCCAAAATCC 332612 Query 349497 AGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCC-GAAGAAATTTCATCAATGGTT 349555 |||| | || ||||| || | | || || |||| || || || || || ||||| Sbjct 332613 AGGTGCAGTACAAAGGGGA-CGAGAAGGCCTTCAACCCAGAGGAGATCTCCTCCATGGTG 332671 Query 349556 TTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTT 349615 | |||||||||||||| ||||| ||||| || | ||| || ||| | | || || Sbjct 332672 CTGGTTAAAATGAAGGAGATTGCAGAAGCCTACCTGGGTCAACGGGTATCCAACGCCGTG 332731 Query 349616 ATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGC 349675 | || || || ||||| ||||| || ||||||| || || |||||||| ||| | Sbjct 332732 GTCACGGTCCCCGCCTACTTTAACGACTCCCAGCGGCAGGCCACCAAAGATGCGGGCGTC 332791 Query 349676 ATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATAT 349735 || || || | || | || || || || || || ||||| || ||||| || || ||| Sbjct 332792 ATCGCTGGACTGAACATCCTGAGGATCATCAACGAGCCCACAGCGGCAGCCATCGCCTAT 332851 Query 349736 GGGCTTGATAAAATGAGTGACCAA------GaaaaaaaTATTCTTATTTTTGATTTAGGT 349789 || || || ||| | |||| ||| || | ||||||||||| | || Sbjct 332852 GGCCTGGACAAA------GGCCAATCGGCGGAACGCAACGTCCTTATTTTTGACCTGGGC 332905 Query 349790 GGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCA 349849 || || || || || || || | || || | || | || || ||||| || ||||| Sbjct 332906 GGCGGCACCTTCGACGTGTCCATCCTGACCATCGAGGGCGGCATCTTTGAGGTCAAAGCC 332965 Query 349850 ACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTT 349909 || || || || || || || || || || || ||||| || || | || ||| ||| Sbjct 332966 ACCGCCGGAGACACGCACCTGGGCGGGGAGGACTTTGACAACCGCATGGTGGAGCACTTT 333025 Query 349910 GTTAAAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATGCG 349968 || || || ||| | |||| |||| || || || | || || || || | Sbjct 333026 GTGGCCGAGTTCAAGAG-GAAGCACAAAAAGGACATCGGCCAGAACAAAAGGGCCTTGAG 333084 Query 349969 TCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTC 350028 | || | || || || || | || ||| | | | || || | |||| || Sbjct 333085 GAGGCTGCGCACCGCCTGCGAGAGGGCAAAGAGGACGCTGTCCTCCAGCTCCCAGGCCAA 333144 Query 350029 TATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCG 350088 || || || || ||||| ||| ||| || |||| | || || || | ||||| Sbjct 333145 CATCGAGATCGACTCTCTCTTTGAGGGCGTGGACTTCTACACTTCCATCACCAGGGCTCG 333204 Query 350089 GTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATT 350148 || || || | || || || || || | ||| |||| || ||||| |||| | Sbjct 333205 CTTCGAGGAGCTGTGCTCAGACCTGTTCAGGGGAACTCTGGAGCCAGTGGAGAAAGCGCT 333264 Query 350149 AAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTAC 350208 || || || || ||| ||| ||||| | || || || | ||||| || || || Sbjct 333265 GAAGGACGCCAAGATGGACAAGGGCCAGATCCACGACGTGGTCCTGGTTGGGGGCTCCAC 333324 Query 350209 ACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAAC-CTTCTA 350267 || || || | | | ||| || |||| || |||||||| ||||| |||| | | Sbjct 333325 CCGGATCCCCAGAATCCAAAAGCTACTGCAAGACTTTTTTAACGGCAAGGAACTGAACAA 333384 Query 350268 GATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGC 350316 || | ||||||||||| || || || || || || || || || ||||| Sbjct 333385 GAGC-ATTAATCCAGACGAGGCGGTGGCTTACGGCGCCGCGGTCCAGGC 333432 >seq10769 Length=223 Score = 109 bits (120), Expect = 2e-18 Identities = 153/215 (71%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 223727 TCTCTTGATATTAATTCATTTGAAAATGTTAATCCAGGCATTAAACCTCTCTTTTTCATC 223786 || ||||| || || || |||||||| || ||||| ||||| || || | ||||||| | Sbjct 223 TCCCTTGAAATCAACTCGTTTGAAAAGGTCAATCCGGGCATCAATCCACGTTTTTTCAAC 164 Query 223787 CAAAATATTGCGCAAAAAGCTCCTGaaaaaaaTATACCTTCTACACAAGCAAACGCTACT 223846 || || || | ||||| || |||||||| || || || || ||| ||||| || | Sbjct 163 CAGAAAATAGAACAAAAGGCCCCTGAAAAGAAAATGCCCTCCACAGCTGCAAAAGCAATC 104 Query 223847 AATCGTGTTGCAAAATTTGAATCTTTGTCTCCTATCCATTTTAATGCCCAATCTGCTTTT 223906 | ||| |||||| ||| || ||||||| ||||| ||||||||||| || Sbjct 103 AGGCGTTCAGCAAAACTTGGTGATT------CTATCCACTTTAAGGCCCAATCTGCCTTC 50 Query 223907 TTCTTAATACAAGAAAAATTTTCTAAAGCATTAAA 223941 ||||| ||| | ||||||||| | || ||||| Sbjct 49 TTCTTGATAGCCGGAAAATTTTCAATGGCCTTAAA 15 >seq227 Length=1344502 Score = 109 bits (120), Expect = 2e-18 Identities = 506/794 (64%), Gaps = 7/794 (1%) Strand=Plus/Plus Query 349527 TTTTACCC-GAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCA 349585 || ||||| ||||| || || || ||||| | || ||||||||||| | || ||||| Sbjct 552922 TTCTACCCAGAAGAGATCTCCTCCATGGTGCTGGTCAAAATGAAGGAGACGGCCGAAGCC 552981 Query 349586 TATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCC 349645 || | ||| || || | || || | || || || || || ||||| || || Sbjct 552982 TACCTGGGTCAACGGGTGTCCAGCGCCGTGGTAACGGTCCCCGCTTACTTTAACGACTCC 553041 Query 349646 CAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATT 349705 || || || || |||||||| || ||| ||||| | || | || || || ||| Sbjct 553042 CAACGCCAGGCCACCAAAGATGCGGGTGTCATCGCGGGACTGAACATCCTCAGGATCATT 553101 Query 349706 AATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATG-AGTGACCAAGaaaa 349764 ||||| ||||| || || || || || || || || || |||| ||| | ||| Sbjct 553102 AATGAGCCCACGGCGGCGGCCATCGCTTACGGTCTGGACAAAAGCCAGTCGGGA-GAACG 553160 Query 349765 aaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGA 349824 || || || || ||||| | || || || || || || || || | || || | || Sbjct 553161 CAACATCCTCATCTTTGACCTGGGAGGCGGCACCTTCGACGTGTCCGTCCTGACCATCGA 553220 Query 349825 AGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTT 349884 | || || || || || ||||| || || || ||||||||||| || ||||| || || Sbjct 553221 GGGCGGCATCTTCGAGGTCAAAGCCACCGCAGGGGATACACATCTGGGCGGAGAGGACTT 553280 Query 349885 TGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGC-TAAAATTGATA 349943 ||| || || | || ||| ||||| || || ||| | |||| || | || | Sbjct 553281 TGACAACCGCATGGTGGAGCACTTTGTCGCCGAGTTCAAGAG-GAAGCACAAGAAAGACA 553339 Query 349944 TTGGAGATAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTT 350003 | || | || || || || | | || | || || || || | || ||| | Sbjct 553340 TCGGCCAGAACAAGAGGGCCTTGAGGAGGCTGCGTACCGCCTGCGAGAGGGCCAAGAGGA 553399 Query 350004 CCTTATCATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATT 350063 | | || || | |||| || | || || || || || ||| ||| || | Sbjct 553400 CGCTGTCCTCCAGCTCCCAGGCCAACGTGGAGATCGACTCCCTCTTTGAGGGCCTGGACT 553459 Query 350064 TCTTTTCATCTATTACACGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAA 350123 ||| | | || || | ||||| ||||| || | || || || || || | || Sbjct 553460 TCTACACCGCCATCACCAGGGCTCGCTTTGAGGAGCTGTGCTCCGACCTGTTCAGGGGAA 553519 Query 350124 CAATGGATCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATG 350183 | |||| || ||||| |||| | | || || || ||| ||| ||||| | | Sbjct 553520 CTCTGGAGCCGGTGGAGAAAGCCCTGAGGGACGCCAAGATGGACAAGGGCCAGATCCACG 553579 Query 350184 AAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGT 350243 | || ||| ||||||| || || ||||| ||||| | | | || || | || || | Sbjct 553580 ACGTGGTTCTAGTTGGCGGCTCCACACGGATTCCCAGAATCCAGAAGCTCCTGCGGGACT 553639 Query 350244 TTTTTAATGGCAAAGAACCTTCT-AGATCAATTAATCCAGATGAAGCTGTTGCATATGGT 350302 |||| || |||||||| | | ||| | || || || || || || || || || || Sbjct 553640 TTTTCAACGGCAAAGAGCTGAATAAGAGC-ATCAACCCCGACGAGGCGGTGGCTTACGGC 553698 Query 350303 GCTGCTGTTCAGGC 350316 || || |||||||| Sbjct 553699 GCGGCCGTTCAGGC 553712 Score = 105 bits (116), Expect = 2e-17 Identities = 258/387 (67%), Gaps = 3/387 (1%) Strand=Plus/Minus Query 349527 TTTTACCC-GAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCA 349585 || ||||| ||||| || || || ||||| | || ||||||||||| | || ||||| Sbjct 590487 TTCTACCCAGAAGAGATCTCCTCCATGGTGCTGGTCAAAATGAAGGAGACGGCCGAAGCC 590428 Query 349586 TATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCC 349645 || | ||| || || | || || | || || || || || ||||| || || Sbjct 590427 TACCTGGGTCAACGGGTGTCCAGCGCCGTGGTAACGGTCCCCGCTTACTTTAACGACTCC 590368 Query 349646 CAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATT 349705 || || || || |||||||| || ||| ||||| | || | || || || ||| Sbjct 590367 CAACGCCAGGCCACCAAAGATGCGGGTGTCATCGCGGGACTGAACATCCTCAGGATCATT 590308 Query 349706 AATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATG-AGTGACCAAGaaaa 349764 ||||| ||||| || || || || || || || || || |||| ||| | ||| Sbjct 590307 AATGAGCCCACGGCGGCGGCCATCGCTTACGGTCTGGACAAAAGCCAGTCGGGA-GAACG 590249 Query 349765 aaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGA 349824 || || || || ||||| | || || || || || || || || | || || | || Sbjct 590248 CAACATCCTCATCTTTGACCTGGGAGGCGGCACCTTCGACGTGTCCGTCCTGACCATCGA 590189 Query 349825 AGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTT 349884 | || || || || || ||||| || || || ||||||||||| || ||||| || || Sbjct 590188 GGGCGGCATCTTCGAGGTCAAAGCCACCGCCGGGGATACACATCTGGGCGGAGAGGACTT 590129 Query 349885 TGATAATCGTCTCGTTTCGCATTTTGT 349911 ||| || || | || ||| ||||| Sbjct 590128 TGACAACCGCATGGTGGAGCACTTTGT 590102 Score = 102 bits (112), Expect = 2e-16 Identities = 257/387 (66%), Gaps = 3/387 (1%) Strand=Plus/Minus Query 349527 TTTTACCC-GAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCA 349585 || ||||| ||||| || || || ||||| | || ||||||||||| | || ||||| Sbjct 570157 TTCTACCCAGAAGAGATCTCCTCCATGGTGCTGGTCAAAATGAAGGAGACGGCCGAAGCC 570098 Query 349586 TATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCC 349645 || | ||| || || | || || | || || || || || ||||| || || Sbjct 570097 TACCTGGGTCAACGGGTGTCCAGCGCCGTGGTAACGGTCCCCGCTTACTTTAACGACTCC 570038 Query 349646 CAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATT 349705 || || || || |||||||| || ||| ||||| | || | || || || ||| Sbjct 570037 CAACGCCAGGCCACCAAAGATGCGGGTGTCATCGCGGGACTGAACATCCTCAGGATCATT 569978 Query 349706 AATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATG-AGTGACCAAGaaaa 349764 ||||| ||||| || || || || || || || || || |||| ||| | ||| Sbjct 569977 AATGAGCCCACGGCGGCGGCCATCGCTTACGGTCTGGACAAAAGCCAGTCGGGA-GAACG 569919 Query 349765 aaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGA 349824 || || || || || || | || || || || || || || || | || || | || Sbjct 569918 CAACATCCTCATCTTCGACCTGGGCGGCGGCACCTTCGACGTGTCCGTCCTGACCATCGA 569859 Query 349825 AGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTT 349884 | || || || || || ||||| || || || ||||||||||| || ||||| || || Sbjct 569858 GGGCGGCATCTTCGAGGTCAAAGCCACCGCCGGGGATACACATCTGGGCGGAGAGGACTT 569799 Query 349885 TGATAATCGTCTCGTTTCGCATTTTGT 349911 ||| || || | || ||| ||||| Sbjct 569798 TGACAACCGCATGGTGGAGCACTTTGT 569772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1514528755558731