Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08]
37,377 sequences; 493,775,940 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq1473 168 2e-36
seq809 168 2e-36
seq1298 145 2e-29
seq10769 109 2e-18
seq227 109 2e-18
>seq1473
Length=2736273
Score = 168 bits (186), Expect = 2e-36
Identities = 176/231 (76%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
||| ||||| || | | || ||||||||||| |||||||||||||| || || || ||
Sbjct 1454288 CATGCCACCTCGCAGACGCAGGACAAGATGAAGGGTAGACTCTTTTTGGATGTTGTAGTC 1454229
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|||||| || || |||||||| | ||| || ||||||||||| | | |||||||||||
Sbjct 1454228 AGATAAGGTGCGTCCATCTTCTAATTGCTTACCAGCAAAGATCAACCTCTGCTGATCAGG 1454169
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
||||| ||||| || ||||| |||||||| || ||||| |||| | ||| ||
Sbjct 1454168 GGGAATGCCTTCCTTGTCCTGGATTTTAGCCTTCACATTCTCAACAGTGTCACTGCCCTC 1454109
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| ||||| || | ||||| || || || || |||||||| ||||||||
Sbjct 1454108 GACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTTACAAAGATCTGCAT 1454058
Score = 168 bits (186), Expect = 2e-36
Identities = 176/231 (76%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
||| ||||| |||| | || || |||||||| |||| ||| ||||| || || |||||
Sbjct 1454972 CATGCCACCTCGTAGACGCAGGACGAGATGAAGCGTAGCCTCCTTTTGGATGTTGTAATC 1454913
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
||| | || || |||||||| || || |||||||||||||| || | ||| || |||||
Sbjct 1454912 AGAGAGGGTACGGCCATCTTCTAGCTGCTTTCCAGCAAAGATCAGCCTTTGTTGGTCAGG 1454853
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
||||| ||||| || ||||| |||||||| || ||||| |||| | |||| | |||
Sbjct 1454852 GGGAATACCTTCCTTGTCCTGGATTTTAGCCTTGACATTCTCAACTGTATCATTGGCTTC 1454793
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||| ||||| || | ||||| || || || || || ||||| | ||||||
Sbjct 1454792 AACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACAAACAACTGCAT 1454742
Score = 161 bits (178), Expect = 3e-34
Identities = 172/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570
|||||||| | | || |||||||| || || ||||| ||||| || || || || ||
Sbjct 2588184 CCACCACGCAGACGCAGGACAAGATGGAGGGTGGACTCCTTTTGGATGTTGTAGTCTGAC 2588125
Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630
| ||| || |||||||| ||||| || ||||||||||| | | ||||| || || |||
Sbjct 2588124 AGTGTGCGGCCATCTTCTAGTTGCTTGCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGA 2588065
Query 140631 ATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACT 140690
|| ||||| || ||||| ||||| ||||| ||||| ||||| | ||| ||||||||
Sbjct 2588064 ATGCCTTCCTTGTCCTGGATTTTGGCTTTGACATTCTCAATGGTGTCACTGGGTTCAACC 2588005
Query 140691 TCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||||| || | |||||| || || || || || || || ||||||||
Sbjct 2588004 TCAAGGGTGATTGTCTTGCCAGTGAGCGTCTTCACGAAGATCTGCAT 2587958
Score = 159 bits (176), Expect = 1e-33
Identities = 163/213 (77%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585
|| |||||||| || || |||||||| || || || || ||||| | || || ||||||
Sbjct 1452445 AGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCT 1452386
Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645
|| | ||||| ||||||||||| | | |||||||||||||||||| ||||| || |||
Sbjct 1452385 TCCAACTGTTTGCCAGCAAAGATCAACCTTTGCTGATCAGGAGGAATACCTTCCTTGTCC 1452326
Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705
|| ||||| ||||| ||||| |||| | ||| |||||| ||||| || | |||
Sbjct 1452325 TGGATTTTGGCTTTAACATTCTCAACAGTGTCACTGCCTTCAACCTCAAGGGTGATGGTC 1452266
Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738
|| || ||||| || || ||||| || ||||||
Sbjct 1452265 TTGCCAGTTAGGGTCTTCACAAAGATTTGCATT 1452233
Score = 158 bits (174), Expect = 4e-33
Identities = 162/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585
|| |||||||| || || || ||||| || || || |||||||| | ||| || ||||||
Sbjct 1455181 AGGACAAGATGGAGGGTTGATTCTTTCTGGATGTTGTAATCAGAGAGTGTGCGGCCATCT 1455122
Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645
|| | |||||| |||||||| || | | || |||||||| ||||||||||| || |||
Sbjct 1455121 TCTAATTGTTTGCCAGCAAATATCAACCTCTGTTGATCAGGGGGAATTCCTTCCTTGTCC 1455062
Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705
|| ||||| ||||| ||||| |||| || ||| ||||| ||||| || | |||
Sbjct 1455061 TGGATTTTGGCTTTCACATTCTCAACCGTGTCACTGTCCTCAACCTCAAGAGTGATGGTC 1455002
Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || || || || || ||||||||||||||
Sbjct 1455001 TTACCAGTAAGGGTCTTCACAAAAATCTGCAT 1454970
Score = 156 bits (172), Expect = 1e-32
Identities = 181/243 (74%), Gaps = 1/243 (0%)
Strand=Plus/Minus
Query 140495 ACTAATATTTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTG 140554
|| ||||||| ||| ||||| || | | | |||||||| || || ||||| || ||
Sbjct 1453387 ACAAATATTTG-CATGCCACCTCGCAGACGCAAGACAAGATGGAGGGTGGACTCCTTCTG 1453329
Query 140555 AATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACG 140614
||| || || || || | || || |||||||| |||||||| |||||||| || | |
Sbjct 1453328 AATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGTTGTTTGCCAGCAAATATCAACCT 1453269
Query 140615 TTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGA 140674
|| || ||||||||||| |||||||| ||||| ||||| || || ||||| |||| |
Sbjct 1453268 CTGTTGGTCAGGAGGAATGCCTTCTTTGTCCTGGATTTTGGCCTTCACATTCTCAACTGT 1453209
Query 140675 ATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTG 140734
||| ||||| ||||| || || ||||| || ||||| || |||||||| |||||
Sbjct 1453208 GTCACTCCCCTCAACCTCAAGAGTGACGGTCTTGCCAGTTAGGGTCTTTACAAAGATCTG 1453149
Query 140735 CAT 140737
|||
Sbjct 1453148 CAT 1453146
Score = 152 bits (168), Expect = 2e-31
Identities = 161/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585
|| |||||||| ||||| ||||| || || || || || || |||| ||| || ||||||
Sbjct 2587941 AGGACAAGATGGAGAGTTGACTCCTTCTGGATGTTGTAGTCTGATAGTGTACGGCCATCT 2587882
Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645
|| ||||| || ||||||||||| | | ||||| || || ||||| ||||| || |||
Sbjct 2587881 TCTAGTTGCTTGCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCC 2587822
Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705
|| ||||| ||||| ||||| || || | ||| |||||||| ||||| || | |||
Sbjct 2587821 TGGATTTTGGCTTTGACATTCTCGATGGTGTCACTGGGTTCAACCTCAAGGGTTATGGTC 2587762
Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || || || || || || || ||||||||
Sbjct 2587761 TTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 2587730
Score = 150 bits (166), Expect = 5e-31
Identities = 172/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
||| ||||| || | | || |||||||| || || ||||| || || || || || ||
Sbjct 1453832 CATGCCACCTCGCAGACGCAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 1453773
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
||| | || || |||||||| |||||||| |||||||| || | | || || |||||
Sbjct 1453772 AGAGAGGGTCCGTCCATCTTCCAGTTGTTTGCCAGCAAATATCAACCTCTGTTGGTCAGG 1453713
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
|||||| |||||||| ||||||||||| || || || || |||| | |||| ||
Sbjct 1453712 AGGAATGCCTTCTTTGTCCTGAATTTTGGCCTTCACGTTCTCAACAGTATCACTCCCCTC 1453653
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||| ||||| || || ||||| || ||||| || || ||||| || |||||
Sbjct 1453652 AACCTCAAGAGTGACAGTCTTGCCAGTTAGGGTCTTCACAAATATTTGCAT 1453602
Score = 147 bits (162), Expect = 7e-30
Identities = 171/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
||| ||||| || | | || |||||||| || || |||||||| || || || || ||
Sbjct 1452920 CATGCCACCTCGCAGACGCAGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTC 1452861
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
||| | || || |||||||| |||||||| |||||||| || | | ||||| |||||
Sbjct 1452860 AGAGAGGGTGCGGCCATCTTCCAGTTGTTTGCCAGCAAATATCAACCTCTGCTGGTCAGG 1452801
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
|||||| |||||||| ||||||||||| | || ||||| |||| | ||| ||
Sbjct 1452800 AGGAATGCCTTCTTTGTCCTGAATTTTCACCTTGACATTTTCAACAGTGTCACTGTCCTC 1452741
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||| ||||| || | || || || || || || || ||||| ||||||||
Sbjct 1452740 AACCTCAAGGGTGATGGTTTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 1452690
Score = 147 bits (162), Expect = 7e-30
Identities = 158/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 140529 ACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCA 140588
|||||||| || || ||||| || || || || || ||||| | | || ||||||||
Sbjct 1453126 ACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGAGCGGCCATCTTCC 1453067
Query 140589 AGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGA 140648
|||||||| |||||||| || | | || || ||||||||||| |||||||| |||||
Sbjct 1453066 AGTTGTTTGCCAGCAAATATCAACCTCTGTTGGTCAGGAGGAATGCCTTCTTTGTCCTGG 1453007
Query 140649 ATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTT 140708
||||| || || ||||| |||| | ||| ||||| ||||| || || |||||
Sbjct 1453006 ATTTTGGCCTTCACATTCTCAACTGTGTCACTCCCCTCAACCTCAAGAGTGACGGTCTTG 1452947
Query 140709 CCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| ||||| || |||||||| ||||||||
Sbjct 1452946 CCAGTTAGGGTCTTTACAAAGATCTGCAT 1452918
Score = 147 bits (162), Expect = 7e-30
Identities = 171/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
||| ||||| || | | || |||||||| || || || || || || || || || ||
Sbjct 1454060 CATGCCACCTCGCAGACGCAGGACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTC 1454001
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
||| | || || |||||||| |||||||| |||||||| || | | || || |||||
Sbjct 1454000 AGAGAGAGTGCGGCCATCTTCCAGTTGTTTGCCAGCAAATATCAACCTCTGTTGGTCAGG 1453941
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
|||||| ||||| || ||||| ||||| || || ||||| |||| | ||| | ||
Sbjct 1453940 AGGAATGCCTTCCTTGTCCTGGATTTTGGCCTTCACATTCTCAACAGTGTCACTTCCCTC 1453881
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||||||||| || | ||||| || || || ||||| ||||| ||||||||
Sbjct 1453880 AACTTCAAGGGTGATGGTCTTGCCAGTAAGGGTTTTCACAAATATCTGCAT 1453830
Score = 140 bits (154), Expect = 1e-27
Identities = 158/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585
|| |||||||| || || ||||| || || || || || ||||| | || || || |||
Sbjct 2590190 AGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGAGTGCGACCGTCT 2590249
Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645
|| || || || ||||||||||| | | ||||| ||||| ||||| ||||| || |||
Sbjct 2590250 TCCAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCAGGTGGAATGCCTTCCTTGTCC 2590309
Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705
|| ||||| ||||| ||||| ||||| | ||| || ||||| || || || | |||
Sbjct 2590310 TGGATTTTGGCTTTGACATTCTCAATAGTGTCACTGGGCTCAACCTCGAGGGTGATGGTC 2590369
Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || || || || || ||||| ||||||||
Sbjct 2590370 TTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 2590401
Score = 138 bits (152), Expect = 3e-27
Identities = 169/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
||| ||||| | || | || |||||||||||||||| || ||||| || || || ||
Sbjct 1454744 CATGCCACCTCTCAAACGCAGGACAAGATGAAGAGTAGCTTCCTTTTGGATGTTGTAGTC 1454685
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
||| | || || || | | || ||||| ||||||||||| || | || |||| |||
Sbjct 1454684 AGAGAGGGTGCGATCACATCCCAGCTGTTTGCCAGCAAAGATCAGCCTCTGGTGATGAGG 1454625
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
||||| ||||| || || | ||||| ||||| ||||| |||| | |||| ||
Sbjct 1454624 CGGAATACCTTCCTTGTCTTTGATTTTGGCTTTGACATTCTCAACAGTATCACTGCCCTC 1454565
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| ||||| || | |||||| || ||||| ||||| ||||| ||||||||
Sbjct 1454564 GACCTCAAGAGTGATTGTCTTGCCAGTTAGGGTTTTCACAAAGATCTGCAT 1454514
Score = 123 bits (136), Expect = 8e-23
Identities = 174/243 (72%), Gaps = 1/243 (0%)
Strand=Plus/Minus
Query 140495 ACTAATATTTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTG 140554
|| ||||||| ||| ||||| || | | | |||||||| || || ||||| || ||
Sbjct 1453615 ACAAATATTTG-CATGCCACCTCGCAGACGCAAGACAAGATGGAGGGTGGACTCCTTCTG 1453557
Query 140555 AATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACG 140614
|| || || ||||| | || || |||||||| |||||||| |||||||| || | |
Sbjct 1453556 GATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCGAGTTGTTTGCCAGCAAATATCAACCT 1453497
Query 140615 TTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGA 140674
|| || ||||||||||| |||||||| ||||||||||| | || ||||| || | |
Sbjct 1453496 CTGTTGGTCAGGAGGAATGCCTTCTTTGTCCTGAATTTTGACCTTCACATTTTCCACAGT 1453437
Query 140675 ATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTG 140734
||| ||||| || || || | || || || || || || || ||||| || ||
Sbjct 1453436 GTCACTGTCCTCAACCTCTAGGGTGATAGTTTTGCCAGTGAGGGTCTTCACAAATATTTG 1453377
Query 140735 CAT 140737
|||
Sbjct 1453376 CAT 1453374
>seq809
Length=886213
Score = 168 bits (186), Expect = 2e-36
Identities = 363/540 (67%), Gaps = 2/540 (0%)
Strand=Plus/Minus
Query 349766 aaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAA 349825
||| | ||||| |||||| | || ||||| || |||||||| ||| | | ||| |||||
Sbjct 476506 AATGTGCTTATCTTTGATCTTGGGGGTGGCACCTTTGATGTGTCAATTTTGACAATTGAA 476447
Query 349826 GAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTT 349885
|| ||||| ||||| ||||| | || ||||| ||||| ||||||||||| |||||||||
Sbjct 476446 GATGGAATCTTTGAGGTTAAGTCCACAGCTGGCGATACCCATCTTGGTGGGGAAGATTTT 476387
Query 349886 GATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAG-CTAAAATTGATAT 349944
|| || || | || || || || || || ||||| |||| || | || ||
Sbjct 476386 GACAACCGCATGGTCAACCACTTCATTGCGGAGTTCAAGCG-CAAGTACAAGAAAGACAT 476328
Query 349945 TGGAGATAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTC 350004
| || || |||| ||||||| || | || || || || | || ||||| |
Sbjct 476327 CAGTGACAACAAGCGAGCCGTGCGTCGTCTGCGCACAGCATGCGAGAGGGCAAAGCGCAC 476268
Query 350005 CTTATCATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTT 350064
||| || || | || || || |||||||||||| ||||| ||| || |||||
Sbjct 476267 CTTGTCTTCCAGCACTCAGGCCAGTATTGAAATTGACTCTCTGTATGAGGGAGTTGATTT 476208
Query 350065 CTTTTCATCTATTACACGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAAC 350124
|| | || || || | ||||| ||||| ||| | | || || || | | ||
Sbjct 476207 CTACACCTCCATCACCAGAGCTCGCTTTGAGGAACTCAATGCTGACCTCTTCCGTGGGAC 476148
Query 350125 AATGGATCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGA 350184
|||| || ||||| ||| | | ||||| || ||| |||| | ||| ||||
Sbjct 476147 CTTGGACCCCGTGGAGAAATCACTGCGTGATGCCAAGATGGACAAAGGGCTAATTCATGA 476088
Query 350185 AGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTT 350244
| || || ||||| || || || || || || ||| | ||| || | || || ||
Sbjct 476087 CATTGTCTTGGTTGGCGGCTCCACTCGCATCCCCAAAATCCAAAAGCTGCTGCAGGACTT 476028
Query 350245 TTTTAATGGCAAAGAACCTTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGC 350304
|| ||||||||||| | | | || || ||||||||||||||||| ||||| ||
Sbjct 476027 CTTCAATGGCAAAGAGCTGAACAAAAGCATCAACCCAGATGAAGCTGTTGCCTATGGGGC 475968
Score = 109 bits (120), Expect = 2e-18
Identities = 90/110 (82%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 183681 TCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCCG 183740
||||||||||| ||||| | ||| ||||||||||| || | ||||| ||||| |||||
Sbjct 476385 TCAAAATCTTCCCCACCAAGATGGGTATCGCCAGCTGTGGACTTAACCTCAAAGATTCCA 476444
Query 183741 TCTTCAATATTTAAAATTGATACATCAAATGTACCACCACCCAAATCAAA 183790
|||||||| | |||||||| |||||||| || ||||| || | ||||||
Sbjct 476445 TCTTCAATTGTCAAAATTGACACATCAAAGGTGCCACCCCCAAGATCAAA 476494
Score = 96.9 bits (106), Expect = 1e-14
Identities = 106/141 (75%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 349608 ATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATG 349667
||||||||||||| || || ||||| || |||||| |||| || || ||||||||||
Sbjct 477249 ATGCTGTTATTACGGTGCCCGCCTACTTCAATGATTCCCAACGCCAGGCTACAAAAGATG 477190
Query 349668 CTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAA 349727
| || | || | ||| | |||||||| | || || |||||||| ||||| || || |
Sbjct 477189 CAGGAACAATCTCTGGGCTCAATGTTCTGCGTATCATCAATGAACCAACTGCAGCTGCTA 477130
Query 349728 TTGCATATGGGCTTGATAAAA 349748
| |||||||| | || ||||
Sbjct 477129 TCGCATATGGCTTGGACAAAA 477109
>seq1298
Length=9711636
Score = 145 bits (160), Expect = 2e-29
Identities = 716/1129 (63%), Gaps = 23/1129 (2%)
Strand=Plus/Plus
Query 349198 CGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCG 349257
||| || || ||||| | || || || || || || || | ||||| || |||
Sbjct 332317 CGCAATCGGCATCGACCTGGGCACCACGTACTCCTGCGTGGGTGTTTTCCAGCATGGCAA 332376
Query 349258 TGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTAC 349317
|| || || || || || || || || ||||| || || || ||||| || || ||
Sbjct 332377 AGTGGAGATCATCGCCAACGACCAGGGCAACAGGACCACACCCAGCTACGTGGCGTTCAC 332436
Query 349318 CGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAA 349377
||| || ||| | | || || || | || ||||| |||| || || || | ||
Sbjct 332437 CGACACCGAGAGGCTCATCGGCGACGCCGCCAAAAACCAAGTGGCGTTGAACCCCAGCAA 332496
Query 349378 TACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGA-CAAATCTACACAAT 349436
|| || ||||| || |||||||| || || || || ||| || | || | |||
Sbjct 332497 CACTGTGTTTGACGCCAAGCGACTGATCGGAAGGAGGTTTGACGATCCTGTCGTC-CAAG 332555
Query 349437 CTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTG 349496
| || || |||| || || | || || | || || | || | | ||
Sbjct 332556 CAGACAGGAAGCATTGGCCCTTCAAGGTAGTCGCT---GATGGAGGCAAGGCCAAAATCC 332612
Query 349497 AGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCC-GAAGAAATTTCATCAATGGTT 349555
|||| | || ||||| || | | || || |||| || || || || || |||||
Sbjct 332613 AGGTGCAGTACAAAGGGGA-CGAGAAGGCCTTCAACCCAGAGGAGATCTCCTCCATGGTG 332671
Query 349556 TTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTT 349615
| |||||||||||||| ||||| ||||| || | ||| || ||| | | || ||
Sbjct 332672 CTGGTTAAAATGAAGGAGATTGCAGAAGCCTACCTGGGTCAACGGGTATCCAACGCCGTG 332731
Query 349616 ATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGC 349675
| || || || ||||| ||||| || ||||||| || || |||||||| ||| |
Sbjct 332732 GTCACGGTCCCCGCCTACTTTAACGACTCCCAGCGGCAGGCCACCAAAGATGCGGGCGTC 332791
Query 349676 ATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATAT 349735
|| || || | || | || || || || || || ||||| || ||||| || || |||
Sbjct 332792 ATCGCTGGACTGAACATCCTGAGGATCATCAACGAGCCCACAGCGGCAGCCATCGCCTAT 332851
Query 349736 GGGCTTGATAAAATGAGTGACCAA------GaaaaaaaTATTCTTATTTTTGATTTAGGT 349789
|| || || ||| | |||| ||| || | ||||||||||| | ||
Sbjct 332852 GGCCTGGACAAA------GGCCAATCGGCGGAACGCAACGTCCTTATTTTTGACCTGGGC 332905
Query 349790 GGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCA 349849
|| || || || || || || | || || | || | || || ||||| || |||||
Sbjct 332906 GGCGGCACCTTCGACGTGTCCATCCTGACCATCGAGGGCGGCATCTTTGAGGTCAAAGCC 332965
Query 349850 ACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTT 349909
|| || || || || || || || || || || ||||| || || | || ||| |||
Sbjct 332966 ACCGCCGGAGACACGCACCTGGGCGGGGAGGACTTTGACAACCGCATGGTGGAGCACTTT 333025
Query 349910 GTTAAAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATGCG 349968
|| || || ||| | |||| |||| || || || | || || || || |
Sbjct 333026 GTGGCCGAGTTCAAGAG-GAAGCACAAAAAGGACATCGGCCAGAACAAAAGGGCCTTGAG 333084
Query 349969 TCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTC 350028
| || | || || || || | || ||| | | | || || | |||| ||
Sbjct 333085 GAGGCTGCGCACCGCCTGCGAGAGGGCAAAGAGGACGCTGTCCTCCAGCTCCCAGGCCAA 333144
Query 350029 TATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCG 350088
|| || || || ||||| ||| ||| || |||| | || || || | |||||
Sbjct 333145 CATCGAGATCGACTCTCTCTTTGAGGGCGTGGACTTCTACACTTCCATCACCAGGGCTCG 333204
Query 350089 GTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATT 350148
|| || || | || || || || || | ||| |||| || ||||| |||| |
Sbjct 333205 CTTCGAGGAGCTGTGCTCAGACCTGTTCAGGGGAACTCTGGAGCCAGTGGAGAAAGCGCT 333264
Query 350149 AAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTAC 350208
|| || || || ||| ||| ||||| | || || || | ||||| || || ||
Sbjct 333265 GAAGGACGCCAAGATGGACAAGGGCCAGATCCACGACGTGGTCCTGGTTGGGGGCTCCAC 333324
Query 350209 ACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAAC-CTTCTA 350267
|| || || | | | ||| || |||| || |||||||| ||||| |||| | |
Sbjct 333325 CCGGATCCCCAGAATCCAAAAGCTACTGCAAGACTTTTTTAACGGCAAGGAACTGAACAA 333384
Query 350268 GATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGC 350316
|| | ||||||||||| || || || || || || || || || |||||
Sbjct 333385 GAGC-ATTAATCCAGACGAGGCGGTGGCTTACGGCGCCGCGGTCCAGGC 333432
>seq10769
Length=223
Score = 109 bits (120), Expect = 2e-18
Identities = 153/215 (71%), Gaps = 6/215 (3%)
Strand=Plus/Minus
Query 223727 TCTCTTGATATTAATTCATTTGAAAATGTTAATCCAGGCATTAAACCTCTCTTTTTCATC 223786
|| ||||| || || || |||||||| || ||||| ||||| || || | ||||||| |
Sbjct 223 TCCCTTGAAATCAACTCGTTTGAAAAGGTCAATCCGGGCATCAATCCACGTTTTTTCAAC 164
Query 223787 CAAAATATTGCGCAAAAAGCTCCTGaaaaaaaTATACCTTCTACACAAGCAAACGCTACT 223846
|| || || | ||||| || |||||||| || || || || ||| ||||| || |
Sbjct 163 CAGAAAATAGAACAAAAGGCCCCTGAAAAGAAAATGCCCTCCACAGCTGCAAAAGCAATC 104
Query 223847 AATCGTGTTGCAAAATTTGAATCTTTGTCTCCTATCCATTTTAATGCCCAATCTGCTTTT 223906
| ||| |||||| ||| || ||||||| ||||| ||||||||||| ||
Sbjct 103 AGGCGTTCAGCAAAACTTGGTGATT------CTATCCACTTTAAGGCCCAATCTGCCTTC 50
Query 223907 TTCTTAATACAAGAAAAATTTTCTAAAGCATTAAA 223941
||||| ||| | ||||||||| | || |||||
Sbjct 49 TTCTTGATAGCCGGAAAATTTTCAATGGCCTTAAA 15
>seq227
Length=1344502
Score = 109 bits (120), Expect = 2e-18
Identities = 506/794 (64%), Gaps = 7/794 (1%)
Strand=Plus/Plus
Query 349527 TTTTACCC-GAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCA 349585
|| ||||| ||||| || || || ||||| | || ||||||||||| | || |||||
Sbjct 552922 TTCTACCCAGAAGAGATCTCCTCCATGGTGCTGGTCAAAATGAAGGAGACGGCCGAAGCC 552981
Query 349586 TATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCC 349645
|| | ||| || || | || || | || || || || || ||||| || ||
Sbjct 552982 TACCTGGGTCAACGGGTGTCCAGCGCCGTGGTAACGGTCCCCGCTTACTTTAACGACTCC 553041
Query 349646 CAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATT 349705
|| || || || |||||||| || ||| ||||| | || | || || || |||
Sbjct 553042 CAACGCCAGGCCACCAAAGATGCGGGTGTCATCGCGGGACTGAACATCCTCAGGATCATT 553101
Query 349706 AATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATG-AGTGACCAAGaaaa 349764
||||| ||||| || || || || || || || || || |||| ||| | |||
Sbjct 553102 AATGAGCCCACGGCGGCGGCCATCGCTTACGGTCTGGACAAAAGCCAGTCGGGA-GAACG 553160
Query 349765 aaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGA 349824
|| || || || ||||| | || || || || || || || || | || || | ||
Sbjct 553161 CAACATCCTCATCTTTGACCTGGGAGGCGGCACCTTCGACGTGTCCGTCCTGACCATCGA 553220
Query 349825 AGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTT 349884
| || || || || || ||||| || || || ||||||||||| || ||||| || ||
Sbjct 553221 GGGCGGCATCTTCGAGGTCAAAGCCACCGCAGGGGATACACATCTGGGCGGAGAGGACTT 553280
Query 349885 TGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGC-TAAAATTGATA 349943
||| || || | || ||| ||||| || || ||| | |||| || | || |
Sbjct 553281 TGACAACCGCATGGTGGAGCACTTTGTCGCCGAGTTCAAGAG-GAAGCACAAGAAAGACA 553339
Query 349944 TTGGAGATAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTT 350003
| || | || || || || | | || | || || || || | || ||| |
Sbjct 553340 TCGGCCAGAACAAGAGGGCCTTGAGGAGGCTGCGTACCGCCTGCGAGAGGGCCAAGAGGA 553399
Query 350004 CCTTATCATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATT 350063
| | || || | |||| || | || || || || || ||| ||| || |
Sbjct 553400 CGCTGTCCTCCAGCTCCCAGGCCAACGTGGAGATCGACTCCCTCTTTGAGGGCCTGGACT 553459
Query 350064 TCTTTTCATCTATTACACGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAA 350123
||| | | || || | ||||| ||||| || | || || || || || | ||
Sbjct 553460 TCTACACCGCCATCACCAGGGCTCGCTTTGAGGAGCTGTGCTCCGACCTGTTCAGGGGAA 553519
Query 350124 CAATGGATCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATG 350183
| |||| || ||||| |||| | | || || || ||| ||| ||||| | |
Sbjct 553520 CTCTGGAGCCGGTGGAGAAAGCCCTGAGGGACGCCAAGATGGACAAGGGCCAGATCCACG 553579
Query 350184 AAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGT 350243
| || ||| ||||||| || || ||||| ||||| | | | || || | || || |
Sbjct 553580 ACGTGGTTCTAGTTGGCGGCTCCACACGGATTCCCAGAATCCAGAAGCTCCTGCGGGACT 553639
Query 350244 TTTTTAATGGCAAAGAACCTTCT-AGATCAATTAATCCAGATGAAGCTGTTGCATATGGT 350302
|||| || |||||||| | | ||| | || || || || || || || || || ||
Sbjct 553640 TTTTCAACGGCAAAGAGCTGAATAAGAGC-ATCAACCCCGACGAGGCGGTGGCTTACGGC 553698
Query 350303 GCTGCTGTTCAGGC 350316
|| || ||||||||
Sbjct 553699 GCGGCCGTTCAGGC 553712
Score = 105 bits (116), Expect = 2e-17
Identities = 258/387 (67%), Gaps = 3/387 (1%)
Strand=Plus/Minus
Query 349527 TTTTACCC-GAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCA 349585
|| ||||| ||||| || || || ||||| | || ||||||||||| | || |||||
Sbjct 590487 TTCTACCCAGAAGAGATCTCCTCCATGGTGCTGGTCAAAATGAAGGAGACGGCCGAAGCC 590428
Query 349586 TATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCC 349645
|| | ||| || || | || || | || || || || || ||||| || ||
Sbjct 590427 TACCTGGGTCAACGGGTGTCCAGCGCCGTGGTAACGGTCCCCGCTTACTTTAACGACTCC 590368
Query 349646 CAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATT 349705
|| || || || |||||||| || ||| ||||| | || | || || || |||
Sbjct 590367 CAACGCCAGGCCACCAAAGATGCGGGTGTCATCGCGGGACTGAACATCCTCAGGATCATT 590308
Query 349706 AATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATG-AGTGACCAAGaaaa 349764
||||| ||||| || || || || || || || || || |||| ||| | |||
Sbjct 590307 AATGAGCCCACGGCGGCGGCCATCGCTTACGGTCTGGACAAAAGCCAGTCGGGA-GAACG 590249
Query 349765 aaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGA 349824
|| || || || ||||| | || || || || || || || || | || || | ||
Sbjct 590248 CAACATCCTCATCTTTGACCTGGGAGGCGGCACCTTCGACGTGTCCGTCCTGACCATCGA 590189
Query 349825 AGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTT 349884
| || || || || || ||||| || || || ||||||||||| || ||||| || ||
Sbjct 590188 GGGCGGCATCTTCGAGGTCAAAGCCACCGCCGGGGATACACATCTGGGCGGAGAGGACTT 590129
Query 349885 TGATAATCGTCTCGTTTCGCATTTTGT 349911
||| || || | || ||| |||||
Sbjct 590128 TGACAACCGCATGGTGGAGCACTTTGT 590102
Score = 102 bits (112), Expect = 2e-16
Identities = 257/387 (66%), Gaps = 3/387 (1%)
Strand=Plus/Minus
Query 349527 TTTTACCC-GAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCA 349585
|| ||||| ||||| || || || ||||| | || ||||||||||| | || |||||
Sbjct 570157 TTCTACCCAGAAGAGATCTCCTCCATGGTGCTGGTCAAAATGAAGGAGACGGCCGAAGCC 570098
Query 349586 TATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCC 349645
|| | ||| || || | || || | || || || || || ||||| || ||
Sbjct 570097 TACCTGGGTCAACGGGTGTCCAGCGCCGTGGTAACGGTCCCCGCTTACTTTAACGACTCC 570038
Query 349646 CAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATT 349705
|| || || || |||||||| || ||| ||||| | || | || || || |||
Sbjct 570037 CAACGCCAGGCCACCAAAGATGCGGGTGTCATCGCGGGACTGAACATCCTCAGGATCATT 569978
Query 349706 AATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATG-AGTGACCAAGaaaa 349764
||||| ||||| || || || || || || || || || |||| ||| | |||
Sbjct 569977 AATGAGCCCACGGCGGCGGCCATCGCTTACGGTCTGGACAAAAGCCAGTCGGGA-GAACG 569919
Query 349765 aaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGA 349824
|| || || || || || | || || || || || || || || | || || | ||
Sbjct 569918 CAACATCCTCATCTTCGACCTGGGCGGCGGCACCTTCGACGTGTCCGTCCTGACCATCGA 569859
Query 349825 AGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTT 349884
| || || || || || ||||| || || || ||||||||||| || ||||| || ||
Sbjct 569858 GGGCGGCATCTTCGAGGTCAAAGCCACCGCCGGGGATACACATCTGGGCGGAGAGGACTT 569799
Query 349885 TGATAATCGTCTCGTTTCGCATTTTGT 349911
||| || || | || ||| |||||
Sbjct 569798 TGACAACCGCATGGTGGAGCACTTTGT 569772
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1514528755558731
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |