Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= NC_028696.2 Length=41338 Score E Sequences producing significant alignments: (Bits) Value seq4114 84.2 6e-12 >seq4114 Length=201 Score = 84.2 bits (92), Expect = 6e-12 Identities = 95/126 (75%), Gaps = 1/126 (1%) Strand=Plus/Minus Query 39378 TGAAGTGGTCAACAAAAACTGGCCACCGAGTTAGAGTTTTTTCCAGTATCGATTTTCCGA 39437 || ||||||||||||| ||||||||| | |||||| || ||| ||| ||| || Sbjct 201 TGTAGTGGTCAACAAATACTGGCCACAGTATTAGAG-GTTAACCAATATAATCGTTCGGA 143 Query 39438 TTCGTTTGGTGGTAACCCACCATTATATTCGTGCGGTCTTAGTGCGCTGTAATATCCAAC 39497 ||| || |||| ||| || |||||||||| || |||| || | ||||||||| |||| Sbjct 142 TTCATTCGGTGTTAATCCGCCATTATATTGATGTGGTCGTAATTGGCTGTAATAACCAAT 83 Query 39498 GATATA 39503 ||||| Sbjct 82 AATATA 77 Score = 84.2 bits (92), Expect = 6e-12 Identities = 95/126 (75%), Gaps = 1/126 (1%) Strand=Plus/Minus Query 16753 TGAAGTGGTCAACAAAAACTGGCCACCGAGTTAGAGTTTTTTCCAGTATCGATTTTCCGA 16812 || ||||||||||||| ||||||||| | |||||| || ||| ||| ||| || Sbjct 201 TGTAGTGGTCAACAAATACTGGCCACAGTATTAGAG-GTTAACCAATATAATCGTTCGGA 143 Query 16813 TTCGTTTGGTGGTAACCCACCATTATATTCGTGCGGTCTTAGTGCGCTGTAATATCCAAC 16872 ||| || |||| ||| || |||||||||| || |||| || | ||||||||| |||| Sbjct 142 TTCATTCGGTGTTAATCCGCCATTATATTGATGTGGTCGTAATTGGCTGTAATAACCAAT 83 Query 16873 GATATA 16878 ||||| Sbjct 82 AATATA 77 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132101340536200