Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08]
37,377 sequences; 493,775,940 total letters
Query= NC_028696.2
Length=41338
Score E
Sequences producing significant alignments: (Bits) Value
seq4114 84.2 6e-12
>seq4114
Length=201
Score = 84.2 bits (92), Expect = 6e-12
Identities = 95/126 (75%), Gaps = 1/126 (1%)
Strand=Plus/Minus
Query 39378 TGAAGTGGTCAACAAAAACTGGCCACCGAGTTAGAGTTTTTTCCAGTATCGATTTTCCGA 39437
|| ||||||||||||| ||||||||| | |||||| || ||| ||| ||| ||
Sbjct 201 TGTAGTGGTCAACAAATACTGGCCACAGTATTAGAG-GTTAACCAATATAATCGTTCGGA 143
Query 39438 TTCGTTTGGTGGTAACCCACCATTATATTCGTGCGGTCTTAGTGCGCTGTAATATCCAAC 39497
||| || |||| ||| || |||||||||| || |||| || | ||||||||| ||||
Sbjct 142 TTCATTCGGTGTTAATCCGCCATTATATTGATGTGGTCGTAATTGGCTGTAATAACCAAT 83
Query 39498 GATATA 39503
|||||
Sbjct 82 AATATA 77
Score = 84.2 bits (92), Expect = 6e-12
Identities = 95/126 (75%), Gaps = 1/126 (1%)
Strand=Plus/Minus
Query 16753 TGAAGTGGTCAACAAAAACTGGCCACCGAGTTAGAGTTTTTTCCAGTATCGATTTTCCGA 16812
|| ||||||||||||| ||||||||| | |||||| || ||| ||| ||| ||
Sbjct 201 TGTAGTGGTCAACAAATACTGGCCACAGTATTAGAG-GTTAACCAATATAATCGTTCGGA 143
Query 16813 TTCGTTTGGTGGTAACCCACCATTATATTCGTGCGGTCTTAGTGCGCTGTAATATCCAAC 16872
||| || |||| ||| || |||||||||| || |||| || | ||||||||| ||||
Sbjct 142 TTCATTCGGTGTTAATCCGCCATTATATTGATGTGGTCGTAATTGGCTGTAATAACCAAT 83
Query 16873 GATATA 16878
|||||
Sbjct 82 AATATA 77
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 132101340536200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |