Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= NC_028809.1 Length=58637 Score E Sequences producing significant alignments: (Bits) Value seq18074 147 8e-31 >seq18074 Length=241 Score = 147 bits (162), Expect = 8e-31 Identities = 173/231 (75%), Gaps = 11/231 (5%) Strand=Plus/Plus Query 4908 TGTGGGACGCGGTCATGCGCTCCACCTGGGACTGGGCCGAGCCGGGCGTCCTGTTCATCG 4967 |||||||| | ||||| |||||||| || | || ||||||||| || || | |||| Sbjct 14 TGTGGGACCTGATCATGACCTCCACCTACGATTTTGCTGAGCCGGGCTTCGTGCTGATCG 73 Query 4968 ACCGCATCAACGAGATGAACAACCTCCACTACTGC---GAGACCATCGCGGCGACCAACC 5024 |||| ||||| |||| ||||||| ||| || |||| |||| || ||||||| Sbjct 74 ACCGGATCAATGAGAAGAACAACA---ACTGGTGGACGGAGAACATCCGCGCCACCAACC 130 Query 5025 CGTGCGGCGAGCAGCCGCTGCCACCGTTCGGCGCCTGCCTGCTCGGCTCCTTCAACCTGG 5084 | ||||| |||||||| ||||| || | |||||||||||||||||||||| | |||||| Sbjct 131 CCTGCGGTGAGCAGCCCCTGCCGCCCTACGGCGCCTGCCTGCTCGGCTCCGTGAACCTGA 190 Query 5085 TGCGCTACGTCAGCAAGGACATGCACGGCT----GGCGCTTCGACTGGGAC 5131 ||||| |||| | | | | |||| || |||||||||||||||| Sbjct 191 CGCGCTTCGTCGTCGA-CCCCTTCACGCCTCAGGCGCGCTTCGACTGGGAC 240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187433570316726