Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08]
37,377 sequences; 493,775,940 total letters
Query= NC_028809.1
Length=58637
Score E
Sequences producing significant alignments: (Bits) Value
seq18074 147 8e-31
>seq18074
Length=241
Score = 147 bits (162), Expect = 8e-31
Identities = 173/231 (75%), Gaps = 11/231 (5%)
Strand=Plus/Plus
Query 4908 TGTGGGACGCGGTCATGCGCTCCACCTGGGACTGGGCCGAGCCGGGCGTCCTGTTCATCG 4967
|||||||| | ||||| |||||||| || | || ||||||||| || || | ||||
Sbjct 14 TGTGGGACCTGATCATGACCTCCACCTACGATTTTGCTGAGCCGGGCTTCGTGCTGATCG 73
Query 4968 ACCGCATCAACGAGATGAACAACCTCCACTACTGC---GAGACCATCGCGGCGACCAACC 5024
|||| ||||| |||| ||||||| ||| || |||| |||| || |||||||
Sbjct 74 ACCGGATCAATGAGAAGAACAACA---ACTGGTGGACGGAGAACATCCGCGCCACCAACC 130
Query 5025 CGTGCGGCGAGCAGCCGCTGCCACCGTTCGGCGCCTGCCTGCTCGGCTCCTTCAACCTGG 5084
| ||||| |||||||| ||||| || | |||||||||||||||||||||| | ||||||
Sbjct 131 CCTGCGGTGAGCAGCCCCTGCCGCCCTACGGCGCCTGCCTGCTCGGCTCCGTGAACCTGA 190
Query 5085 TGCGCTACGTCAGCAAGGACATGCACGGCT----GGCGCTTCGACTGGGAC 5131
||||| |||| | | | | |||| || ||||||||||||||||
Sbjct 191 CGCGCTTCGTCGTCGA-CCCCTTCACGCCTCAGGCGCGCTTCGACTGGGAC 240
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 187433570316726
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |