Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= NC_028827.1 Length=50165 Score E Sequences producing significant alignments: (Bits) Value seq9184 82.4 2e-11 >seq9184 Length=219 Score = 82.4 bits (90), Expect = 2e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 39208 CTCCTTGGCCAGAACCTCGGGCTTCTTCTTGCCCATGGCCCGACGCAGCAGGTCGGCCTG 39267 || |||||||| | |||| ||||| |||||||||||||| ||||||||||| || Sbjct 25 CTGCTTGGCCATCTCTTCGGCTTTCTTTTTGCCCATGGCCCGCCGCAGCAGGTCCGCGCC 84 Query 39268 GCCCAGGCTGTAGCCAGCGAGGATCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGAT 39327 || || ||||||| || |||| ||| || | | || || |||||||| | ||| Sbjct 85 ACCGAGCGTGTAGCCGGCCAGGACCTGGGCGATTTGCATGACTTGTTCCTGGTACAGGAT 144 Query 39328 GAGCCCGTACGTCGGGTCCA 39347 || ||||| |||| |||| Sbjct 145 GACGCCGTAGGTCGATTCCA 164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160335203318598