Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= NC_028956.1 Length=52139 Score E Sequences producing significant alignments: (Bits) Value seq13990 98.7 3e-16 >seq13990 Length=229 Score = 98.7 bits (108), Expect = 3e-16 Identities = 126/172 (73%), Gaps = 4/172 (2%) Strand=Plus/Minus Query 41122 TTCAGCATATCCGCAGCACTGATAGCGGTCTTCATTGTA--TAAAGTTTTGCAAACGCCA 41179 || || ||||| ||||| |||| ||| |||| || | || ||||||||||| |||| Sbjct 229 TTGAGGATATCAGCAGCCGTGATGGCGTGCTTC--TGCAAGTACAGTTTTGCAAAAGCCA 172 Query 41180 CTTTACTGTAAGTATCAATAAACGTTTGTTGATAAATACGACCCACTCCTTTGAGGTTGC 41239 || ||||||||| || ||||| || ||||| || || || || || |||| ||| Sbjct 171 CTCGCGAGTAAGTATCGATGAACGTCTGCTGATAGATCCGTCCAACACCCTTGATCGTGC 112 Query 41240 CCACATAGAAAGTATCTTGTGAGCCAAGATAGCCAGGGTGTACCGTTTCAAT 41291 |||| || || || || || || |||||||| || |||||| | || || || Sbjct 111 CCACGTAAAACGTGTCCTGCGACCCAAGATAACCGGGGTGTTCGGTCTCGAT 60 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 166649199595074