Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= NC_028976.1 Length=50113 Score E Sequences producing significant alignments: (Bits) Value seq9184 91.5 5e-14 >seq9184 Length=219 Score = 91.5 bits (100), Expect = 5e-14 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 38548 CTCCTTGGCCAGCACCTCGGGCTTCTTCTTGCCCATGGCGCGACGGAGAAGGTCGGCCTG 38607 || |||||||| | | |||| ||||| ||||||||||| || || || ||||| || Sbjct 25 CTGCTTGGCCATCTCTTCGGCTTTCTTTTTGCCCATGGCCCGCCGCAGCAGGTCCGCGCC 84 Query 38608 ACCGAGGGTGTACCCGGCCAGGATCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGAT 38667 |||||| ||||| |||||||||| ||| || | | || || |||||||| | ||| Sbjct 85 ACCGAGCGTGTAGCCGGCCAGGACCTGGGCGATTTGCATGACTTGTTCCTGGTACAGGAT 144 Query 38668 GAGCCCGAAGGTCGGGTCCA 38687 || ||| |||||| |||| Sbjct 145 GACGCCGTAGGTCGATTCCA 164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160168877175550