Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= NC_028980.1 Length=62181 Score E Sequences producing significant alignments: (Bits) Value seq18074 107 8e-19 >seq18074 Length=241 Score = 107 bits (118), Expect = 8e-19 Identities = 133/181 (73%), Gaps = 1/181 (1%) Strand=Plus/Plus Query 33079 GCGC-TGTGGGACGCGATCATGCGCGGGACCTGGGACTGGGCGGAGCCTGGGGTGCTGTT 33137 |||| |||||||| ||||||| | |||| || | || ||||| || | || | Sbjct 9 GCGCGTGTGGGACCTGATCATGACCTCCACCTACGATTTTGCTGAGCCGGGCTTCGTGCT 68 Query 33138 CATCGACGCGATCAACCGCATGAACAACCTCTGGTACTGCGAGACCATCGCCGCCACCAA 33197 |||||| |||||| | ||||||| ||||| |||| |||| ||||||||| Sbjct 69 GATCGACCGGATCAATGAGAAGAACAACAACTGGTGGACGGAGAACATCCGCGCCACCAA 128 Query 33198 CCCCTGCGGTGAGCAACCGCTCCCGCCCTACGGTGCCTGCTTGTTGGGCTCCTTCAACTT 33257 ||||||||||||||| || || ||||||||||| |||||| || | |||||| | ||| | Sbjct 129 CCCCTGCGGTGAGCAGCCCCTGCCGCCCTACGGCGCCTGCCTGCTCGGCTCCGTGAACCT 188 Query 33258 G 33258 | Sbjct 189 G 189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 198763815420174