Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq696 224 8e-54 >seq696 Length=192186 Score = 224 bits (248), Expect = 8e-54 Identities = 195/242 (81%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 29646 TCAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTC 29705 ||| |||||||| ||||| ||||||||||| || || |||| |||||||| || || | Sbjct 54118 TCAACGGTTCCATGTGGTTGAGGTAGACGTGCGCGTCGCCCAACGTGTGGACGAAGTCGC 54177 Query 29706 CCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGT 29765 |||| | || || |||| ||| || ||||||||||||||||| | |||||||||||||| Sbjct 54178 CCGGCTGGAGTCCCGTGATGTGCGCGATCATGTACGTGAGGAGGGCGTAGCTGGCGATGT 54237 Query 29766 TAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTC 29825 | || ||||| || || ||||| || || || | |||||| |||||||| || ||||| | Sbjct 54238 TGAAAGGCACGCCCAGGCCCATATCGCCAGAGCGCTGGTACAGCTGGCAGGACAGCTCGC 54297 Query 29826 CGTCGCTCACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATGAGACCCAAGT 29885 |||||| |||||| ||||| |||| ||||||||| ||||| || ||||| ||| || || Sbjct 54298 CGTCGCACACGTAGAACTGGCACAGGGCATGGCAGGGAGGCAGCGCCATCAGAGGCAGGT 54357 Query 29886 CT 29887 || Sbjct 54358 CT 54359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405978179589022