Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08]
37,377 sequences; 493,775,940 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq1486 86.0 5e-12
>seq1486
Length=661795
Score = 86.0 bits (94), Expect = 5e-12
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631
||||||||||| || || ||||| || || || | ||||||||| | || | || ||
Sbjct 352591 TCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTGAGTCCGGGCATCAGGCCGCGTTTCTTC 352532
Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691
||||| || || ||||| || || || || ||||| ||||| || |||||||| || ||
Sbjct 352531 AGCCAGAAGATGGCGGCGAAGGAGCCGGAGAAGAAGATGCCCTCCACGGCGGCGAAAGCC 352472
Query 4692 AC 4693
||
Sbjct 352471 AC 352470
Score = 86.0 bits (94), Expect = 5e-12
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631
||||||||||| || || ||||| || || || | ||||||||| | || | || ||
Sbjct 357301 TCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTGAGTCCGGGCATCAGGCCGCGTTTCTTC 357360
Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691
||||| || || ||||| || || || || ||||| ||||| || |||||||| || ||
Sbjct 357361 AGCCAGAAGATGGCGGCGAAGGAGCCGGAGAAGAAGATGCCCTCCACGGCGGCGAAAGCC 357420
Query 4692 AC 4693
||
Sbjct 357421 AC 357422
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 426855065161541
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |