Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= NC_030929.1 Length=49033 Score E Sequences producing significant alignments: (Bits) Value seq15553 91.5 5e-14 >seq15553 Length=233 Score = 91.5 bits (100), Expect = 5e-14 Identities = 116/160 (73%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 30359 AGCGGCTTAGGGTCATGTGCCAACGCCGCCAGAAATCTTGAATATCAAGCGCCTTGTAGG 30418 ||||| || || ||||||||||| |||||||| || ||| | ||||| || |||| Sbjct 230 AGCGGGACAGAGTGATGTGCCAACGGCGCCAGAAGTCCACAATGTTGAGCGCTTTATAGG 171 Query 30419 GCGAGTTGAAGTTTATTGGGAGCCAAATGTTAAAGAGAAGGGCCGCGCCTATGGCCATGT 30478 ||||||||||||| || || || | |||| || || |||| || | ||||||| Sbjct 170 GCGAGTTGAAGTTGATGGGCAGGCGAATGCCGAACAGGCGGGCAAGCCCCAAAGCCATGT 111 Query 30479 CGCAGTAACCGCTAAAGTCAAAGTATAGTTGGAATGTGTA 30518 |||| || ||| || || || || | ||||||||||| Sbjct 110 CGCAATAGCCGGAGAAATCGAAATAGATCTGGAATGTGTA 71 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156714411127630