Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= NC_030933.1 Length=133798 Score E Sequences producing significant alignments: (Bits) Value seq8470 100 2e-16 seq23546 82.4 7e-11 >seq8470 Length=217 Score = 100 bits (110), Expect = 2e-16 Identities = 97/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 73117 GAAATTATGTTACCTAATAAAGAAGATTGGTCATTTGTATGTGACCTATCTAGTATGAAC 73176 |||||||||||||| || || || ||||| ||||| |||| |||||| || || || Sbjct 93 GAAATTATGTTACCATCCAATGACGAATGGTCGTTTGTCTGTGTCCTATCAAGCATAAAT 152 Query 73177 CTTGTTAAGTATGATGAATGGAAACACACGGATGCTGTAGAGACACTTGTTTACTTTTTA 73236 ||| | || ||||| |||||||| |||| ||||||||||| || | || || || ||| Sbjct 153 CTTTTGAACTATGACAAATGGAAAGACACCGATGCTGTAGAAACTATGGTGTATTTCTTA 212 Query 73237 GATGC 73241 ||||| Sbjct 213 GATGC 217 >seq23546 Length=320 Score = 82.4 bits (90), Expect = 7e-11 Identities = 150/218 (69%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 70206 TTGATTGGATGTATGAAGATGGGGAACTAGAGTTCTTACCTAAGAAAGTAGTACAAGAAT 70265 |||||||||| | |||||| || ||| |||| ||||||||||| || ||| | |||| Sbjct 305 TTGATTGGATTTTTGAAGAAGGAGAATTAGATTTCTTACCTAAATCTGTTGTAAATGAAT 246 Query 70266 TTATTAAAAATAGGCTTAATAACTCTCTAGTAGCTGTTGGGTATACTAAACTTTTTGATG 70325 |||||||||| | |||| |||||| ||| | | || | | ||| | |||||| Sbjct 245 TTATTAAAAAGCGTTTTAACAACTCTTTAGAGAGTATCGGAATTGCCAAAATATTTGATA 186 Query 70326 TTGATGAAGAGTTACTAAGTGAAGTGTCGTGGTTTGATGATGAAGTTATTAGTACTAAGT 70385 |||| || | || || || ||||||||||||||| |||| | || || Sbjct 185 TTGACCAAAAACTATTAGCACAAACCGAATGGTTTGATGATGAAATTATAGGAACAAA-- 128 Query 70386 TAACG--GACTTTTTATCTAAACGTTCTGTAAACTATA 70421 ||| |||||||| ||||| ||| | || |||| Sbjct 127 ACACGGCGACTTTTTTGTAAAACGCTCTATTAATTATA 90 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427833819104423