Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08]
37,377 sequences; 493,775,940 total letters
Query= NC_030933.1
Length=133798
Score E
Sequences producing significant alignments: (Bits) Value
seq8470 100 2e-16
seq23546 82.4 7e-11
>seq8470
Length=217
Score = 100 bits (110), Expect = 2e-16
Identities = 97/125 (78%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 73117 GAAATTATGTTACCTAATAAAGAAGATTGGTCATTTGTATGTGACCTATCTAGTATGAAC 73176
|||||||||||||| || || || ||||| ||||| |||| |||||| || || ||
Sbjct 93 GAAATTATGTTACCATCCAATGACGAATGGTCGTTTGTCTGTGTCCTATCAAGCATAAAT 152
Query 73177 CTTGTTAAGTATGATGAATGGAAACACACGGATGCTGTAGAGACACTTGTTTACTTTTTA 73236
||| | || ||||| |||||||| |||| ||||||||||| || | || || || |||
Sbjct 153 CTTTTGAACTATGACAAATGGAAAGACACCGATGCTGTAGAAACTATGGTGTATTTCTTA 212
Query 73237 GATGC 73241
|||||
Sbjct 213 GATGC 217
>seq23546
Length=320
Score = 82.4 bits (90), Expect = 7e-11
Identities = 150/218 (69%), Gaps = 4/218 (2%)
Strand=Plus/Minus
Query 70206 TTGATTGGATGTATGAAGATGGGGAACTAGAGTTCTTACCTAAGAAAGTAGTACAAGAAT 70265
|||||||||| | |||||| || ||| |||| ||||||||||| || ||| | ||||
Sbjct 305 TTGATTGGATTTTTGAAGAAGGAGAATTAGATTTCTTACCTAAATCTGTTGTAAATGAAT 246
Query 70266 TTATTAAAAATAGGCTTAATAACTCTCTAGTAGCTGTTGGGTATACTAAACTTTTTGATG 70325
|||||||||| | |||| |||||| ||| | | || | | ||| | ||||||
Sbjct 245 TTATTAAAAAGCGTTTTAACAACTCTTTAGAGAGTATCGGAATTGCCAAAATATTTGATA 186
Query 70326 TTGATGAAGAGTTACTAAGTGAAGTGTCGTGGTTTGATGATGAAGTTATTAGTACTAAGT 70385
|||| || | || || || ||||||||||||||| |||| | || ||
Sbjct 185 TTGACCAAAAACTATTAGCACAAACCGAATGGTTTGATGATGAAATTATAGGAACAAA-- 128
Query 70386 TAACG--GACTTTTTATCTAAACGTTCTGTAAACTATA 70421
||| |||||||| ||||| ||| | || ||||
Sbjct 127 ACACGGCGACTTTTTTGTAAAACGCTCTATTAATTATA 90
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427833819104423
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |