Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08]
37,377 sequences; 493,775,940 total letters
Query= NC_031127.1
Length=240761
Score E
Sequences producing significant alignments: (Bits) Value
seq22170 93.3 7e-14
seq4331 86.0 1e-11
>seq22170
Length=289
Score = 93.3 bits (102), Expect = 7e-14
Identities = 70/81 (86%), Gaps = 1/81 (1%)
Strand=Plus/Plus
Query 5492 TAGTTCAGTTGGTAGAACGGTGGACTGTTAATCCATATGTCGCAGGTTCGAGTCCTGCCA 5551
||||||||| |||||||||| ||||||||||||| |||||||| ||||| ||||| ||
Sbjct 83 TAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGTCGCTGGTTCAAGTCCAGCAG 142
Query 5552 GAGTCGCCACATTTTGCATTG 5572
||| ||||||||||| ||||
Sbjct 143 GAGGAGCCACATTTTG-ATTG 162
>seq4331
Length=202
Score = 86.0 bits (94), Expect = 1e-11
Identities = 55/59 (93%), Gaps = 1/59 (2%)
Strand=Plus/Minus
Query 4594 TTAGCTCAGTTGGT-AGAGCGCACCCCTGATAAGGGTGAGGCCACTGGTTCAAGTCCAG 4651
|||||||||||||| |||||||||||||||||||||||||| | ||||||||| |||||
Sbjct 68 TTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCTCTGGTTCAAATCCAG 10
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 769947302847320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |