Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= NC_031224.1 Length=59443 Score E Sequences producing significant alignments: (Bits) Value seq696 87.8 7e-13 >seq696 Length=192186 Score = 87.8 bits (96), Expect = 7e-13 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 52110 ATGGCGTTGGCTCCCTGCCATACACTATTCCAATTCTATGTAGCTGAAGGTAAGCTTTCG 52169 |||||| || ||||||||||| | || | ||| ||||| || || || |||| || Sbjct 54346 ATGGCGCTGCCTCCCTGCCATGCCCTGTGCCAGTTCTACGTGTGCGACGGCGAGCTGTCC 54287 Query 52170 TGCCATTTGTATCAGCGGTCTGCCGACATGTTCTTGGGCGTTCCGTTTAACATTGCCAGC 52229 ||||| |||| ||||| |||| ||| ||| | ||||||| || || ||||| |||||| Sbjct 54286 TGCCAGCTGTACCAGCGCTCTGGCGATATGGGCCTGGGCGTGCCTTTCAACATCGCCAGC 54227 Query 52230 TATTCCTTGCTGACGCATCTGATTGC 52255 || || | || ||| | |||| || Sbjct 54226 TACGCCCTCCTCACGTACATGATCGC 54201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190011625533970