Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= NC_031944.1 Length=185102 Score E Sequences producing significant alignments: (Bits) Value seq19548 145 9e-30 >seq19548 Length=251 Score = 145 bits (160), Expect = 9e-30 Identities = 121/148 (82%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 171465 GCAGCAGAAGATCCAGAGTTCGAGACGTTCTATACCAAGAACATCCTATTGAATGAAGGT 171524 || |||||||||||||| || || || |||||||| || || || |||| || |||||| Sbjct 219 GCTGCAGAAGATCCAGAATTTGAAACATTCTATACAAAAAATATTTTATTAAACGAAGGT 160 Query 171525 CTTCGTGCATGGATGGCACCAGTAGACCAACCACATGAAAACTTTGTGTTCCCAGAGGAA 171584 ||||||||||||||||| || ||| |||||||||||||||||||| ||||| ||||| Sbjct 159 ATTCGTGCATGGATGGCAGCACAAGATCAACCACATGAAAACTTTGTATTCCCTGAGGAG 100 Query 171585 GTTCTACCTCGTGGCAATGCACTTTGAT 171612 || |||| ||||| || || |||| || Sbjct 99 GTATTACCACGTGGAAACGCCCTTTAAT 72 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 591921717505040