Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ictalurus_20punctatus_20[refseq_20GCF_5F001660625.1_202016-06-21] 9,341 sequences; 783,274,721 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq25 93.3 4e-14 >seq25 Length=19457651 Score = 93.3 bits (102), Expect = 4e-14 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 16226 TCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTT 16285 || ||||||||||| ||||| ||||| || || | |||||||| || | ||||| Sbjct 18110019 TCATCTCTGCTGATGAGTTCATTGGAGAAGGTGAGGCCTGGCATAAGGCCCCTCTTCTTC 18109960 Query 16286 AACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGC 16344 | |||||| || |||||||| ||||| || ||||| || ||||| |||| |||||||| Sbjct 18109959 AGCCAGAAAATTGCAGCAAAAGACCCAGAGAAGAAGATTCCCTCCACAGCAGCAAAAGC 18109901 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511354685976120