Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ictalurus_20punctatus_20[refseq_20GCF_5F001660625.1_202016-06-21] 9,341 sequences; 783,274,721 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq7 87.8 1e-12 >seq7 Length=31027439 Score = 87.8 bits (96), Expect = 1e-12 Identities = 125/176 (71%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 18960 GATATCCCCTTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAAC 19019 ||| | ||| | |||| || || || ||||| | || || ||||| ||||| || | Sbjct 6112575 GATCTTCCCCTGATGGCTCTGCCACCCTGTCATGCTTTGTGCCAGTTCTACGTCTCAGAT 6112634 Query 19020 GGTGAATTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTC 19079 ||||| | || || || |||||||| | || || || || ||||| || || || ||| Sbjct 6112635 GGTGAGCTGTCATGTCAGTTATACCAGCGTTCAGGAGACATCGGCCTGGGTGTCCCCTTC 6112694 Query 19080 AACATTGCTGGATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAA 19135 |||||||| | ||||| || || || ||||| | || ||| | ||||| || || Sbjct 6112695 AACATTGCCAGCTATGCCCTACTCACATACATGATCGCCCATATCACAGGGCTCAA 6112750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399458519091345