Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ictalurus_20punctatus_20[refseq_20GCF_5F001660625.1_202016-06-21] 9,341 sequences; 783,274,721 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq7 107 1e-18 >seq7 Length=31027439 Score = 107 bits (118), Expect = 1e-18 Identities = 127/172 (74%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176 |||| |||||||||||| | || | ||| | |||||| |||||||| || || || || Sbjct 6112741 GTGATATGGGCGATCATGTATGTGAGTAGGGCATAGCTGGCAATGTTGAAGGGGACACCC 6112682 Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAA 97236 || || || || |||| | || ||||||||||| || |||| ||||| | || || Sbjct 6112681 AGGCCGATGTCTCCTGAACGCTGGTATAACTGACATGACAGCTCACCATCTGAGACGTAG 6112622 Query 97237 AACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGA 97288 ||||| | ||| |||||||||| |||| ||||| |||| |||| ||| Sbjct 6112621 AACTGGCACAAAGCATGACAGGGTGGCAGAGCCATCAGGGGAAGATCTGAGA 6112570 Score = 87.8 bits (96), Expect = 1e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 97402 TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCT 97461 || |||||||||||||| ||||||||||| ||||| || || || | ||| ||||| || Sbjct 6110633 TACTCTGCTCCAAAATGTCTCCATTGGAAGCCATACACGGGGCCCAAGTCACCTTCCTCA 6110574 Query 97462 CTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGC 97521 | ||| ||| ||| |||||| | | | | || || || ||||||||||| | | Sbjct 6110573 CGCTCAGTGAATCCATTCTTATCAAGAAACTCTCGGGAGCCGTTGGCATCCCAAATCTTC 6110514 Query 97522 ACACCAGATGCTGCAAGCTCTTT 97544 ||||| ||| ||||||||| Sbjct 6110513 ACACCTTTCTCTGAAAGCTCTTT 6110491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346744520917370