Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ictalurus_20punctatus_20[refseq_20GCF_5F001660625.1_202016-06-21] 9,341 sequences; 783,274,721 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq26 82.4 5e-11 >seq26 Length=19081014 Score = 82.4 bits (90), Expect = 5e-11 Identities = 115/159 (72%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 91859 CTGGAACAAAGTGGCTTCTACTGGGGTCCTTTGGGGGTCGAGGAGGCACATCGTATGCTG 91918 |||| || ||||| ||||||||||||||| ||| || || || || || || || Sbjct 490551 CTGGGTCACAGTGGATTCTACTGGGGTCCTCTGGATGTAGACGAAGCTCA-CGCTCGCCT 490609 Query 91919 CGCAACTCGGCAC-TGGGCAGCTTTCTCATTCGGGATAGCAGGCAAAAGGACGTCTTGTT 91977 || ||| | | | |||| ||| || || ||||| |||| ||||| ||||||||| || Sbjct 490610 GGCGTCTCTTCCCGTTGGCACCTTCCTAATCCGGGACAGCATGCAAACGGACGTCTTCTT 490669 Query 91978 CACGCTGTCGTATCACTCTGTGACCGGACCCGTCAGTGT 92016 ||| ||| |||| ||||| | ||||||| ||| || Sbjct 490670 CACCCTGAGCTATCGCTCTGCGGACGGACCCACCAGCGT 490708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356193045142423