Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ictalurus_20punctatus_20[refseq_20GCF_5F001660625.1_202016-06-21] 9,341 sequences; 783,274,721 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq18 98.7 1e-15 >seq18 Length=24512808 Score = 98.7 bits (108), Expect = 1e-15 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 97179 CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAG 97238 |||||| | |||||| | | ||||| ||||| || ||||||||||| | |||||| Sbjct 14428085 CTGTGGTACGCCATCATTGAGTCTCAGACGGAGACCGGCACTCCGTACATGTTATACAAG 14428026 Query 97239 GATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTG 97298 || || |||||||| |||||||| | || |||| |||||||| || ||| ||| Sbjct 14428025 GACGCCTGCAATCGCAAGAGCAACCAGCAGAACCTGGGTACCATCAAATGCAGCAACCTG 14427966 Query 97299 TGCACGGAAATTGTAGAGTACGCC 97322 ||||| || ||||| |||||| || Sbjct 14427965 TGCACAGAGATTGTGGAGTACACC 14427942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740972672075160